Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0901 ATGAAAGGATATCTGGGCAATTTGGAGGCAACAACAGCAACAGTTGATTCAGAAGGGTGGTTGAGGACAGGTGATCTTAGTTATATTGATGAGAATGGATTTGTTTATCTAGTTGACAGGATAAAAGAGCTAATCAAGCACAATGGGTATCAGGTGGCTCCTGCAGACCTGGAATCTGTGTTGCTAAGTCATCCACTTATTCTTGATGCAGCGGTGCTAAGATATATTGCAGAGTTGAAGATGAAGAAACTGGACAGATACCAATGGCATGTGGTTAGAGCAGCTGATTCTGACCTCTCAGAAGATCAAATCATTCAATTTGTTGCAGGCCAGTTTTTGACTTGCTGTGACTTTGAAAATTCTCAGGTGGCTCCATATAAGAAACTGAGAAGAGTGAGTTTCATTGACACTATTCCAAGATCAGTTGCTGGCAAGATATTGCGCAAGGATCTTGTTTCTCAAAGCAAACATCAACTTGTCTCCAAGTTATGA 492 0.4085 MKGYLGNLEATTATVDSEGWLRTGDLSYIDENGFVYLVDRIKELIKHNGYQVAPADLESVLLSHPLILDAAVLRYIAELKMKKLDRYQWHVVRAADSDLSEDQIIQFVAGQFLTCCDFENSQVAPYKKLRRVSFIDTIPRSVAGKILRKDLVSQSKHQLVSKL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0901 163 Gene3D - 43 161 IPR045851 -
Lal13g0901 163 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 162 - -
Lal13g0901 163 SUPERFAMILY Acetyl-CoA synthetase-like 1 156 - -
Lal13g0901 163 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 1 162 - -
Lal13g0901 163 Gene3D - 1 42 IPR042099 -
Lal13g0901 163 Pfam AMP-binding enzyme 1 46 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0901 Lal-Chr13 6205148 6207509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0901 1 159 Monolignol Biosynthesis Gene Families AT1G20480 52.201 1.20e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0901 K10526 - gmx:100783104 219.164