Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0895 ATGTTTTCTAGAATGATACATCCACATGAAGGAAGTGAAGACATGATGATACAGGGTAGTGGTTCTTCAAACCATAGTCACCTTGGAGACCCATGTCTTGTTTTGACTTCTGATCCAAAACCTCGTCTTCGTTGGACTACTGATCTTCACAACCGATTTGTTGATGCTGTTACTCAACTAGGGGGTGCTAGTAAAGCCACACCGAAAGCAATCATGCGAACCATGAATGTCAAGGGTTTGACTCTCTATCATTTGAAGAGTCATCTTCAGAAGTACAGGCTGGGTAAGCAACCAGGAAAAGATTCTGAGGAGGGATCTAAAGATGGTTCCTATCCTCTAGAAAGCCCTGGTACTGGTAACTCATCTCCAAAGTTAACAGCTTCTGATGCAAATGAGGGTCACGAAGTCAAGGAGGCATTAAGAGCACAGATGGAAATGCAAAGTAAACTGCATTTACTAGTAGAGGCAGAGAAGCACGTGCAGATTCGTCAGGATGCAGAGCGGAGATATATGGCCATGCTTGAGAGAGCGTGTAGGATGTTGGCAGATCAGTTTATCGGCGATACATTTATAGACACAGACAGCCAAAAGCTTCAAGGGCTAGGATGTAGAGCGTCAAGAAGTTCCTTAGTGGATCCCGTTGGCTTCTGCTCCTTACCATCTACTGATGTAGCCGGAATGCATGTTTCAGAATATCCACCAATCCTTCAGCCGCAATGGGCTGGACGTTCGAATGAAAGGTGCCTAACATCACTTGAGAATCTCGGCGGCTTGACATTAGAAGGATCATCTCCTGGTGGAATGAAGAAGAGGATGCAAACCTTGGACTCAATGGTAGGACCTTTGATCTTGAGTGAAACCAACATAAGAACTCAAGGCATCAATTTAGCTCAACTAAATTCTTATGGTATATAA 915 0.4415 MFSRMIHPHEGSEDMMIQGSGSSNHSHLGDPCLVLTSDPKPRLRWTTDLHNRFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQPGKDSEEGSKDGSYPLESPGTGNSSPKLTASDANEGHEVKEALRAQMEMQSKLHLLVEAEKHVQIRQDAERRYMAMLERACRMLADQFIGDTFIDTDSQKLQGLGCRASRSSLVDPVGFCSLPSTDVAGMHVSEYPPILQPQWAGRSNERCLTSLENLGGLTLEGSSPGGMKKRMQTLDSMVGPLILSETNIRTQGINLAQLNSYGI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0895 304 MobiDBLite consensus disorder prediction 1 24 - -
Lal13g0895 304 Gene3D - 39 97 - -
Lal13g0895 304 MobiDBLite consensus disorder prediction 94 132 - -
Lal13g0895 304 Pfam MYB-CC type transfactor, LHEQLE motif 135 179 IPR025756 -
Lal13g0895 304 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 40 95 IPR006447 GO:0003677
Lal13g0895 304 Pfam Myb-like DNA-binding domain 43 93 IPR001005 -
Lal13g0895 304 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 304 - -
Lal13g0895 304 SUPERFAMILY Homeodomain-like 40 95 IPR009057 -
Lal13g0895 304 MobiDBLite consensus disorder prediction 94 108 - -
Lal13g0895 304 MobiDBLite consensus disorder prediction 113 128 - -
Lal13g0895 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 97 IPR017930 -
Lal13g0895 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 304 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0895 Lal-Chr13 6172182 6176547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0895 29 209 G2-like Transcription Factor Family AT3G24120 54.787 6.52e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal13g0895 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0895 - - gmx:100779871 462.611