Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0891 ATGGGAATTGTAGTGGCTGGTGTTGATGATCTGTTGAGTGATAAAGCAGCAAAGATGAGAGAGTCTCTGCAAAAGAGTCAAACCATCACAGAAAATGTTGTTTCCATCCTTGGCTCCTTCGATCACCGTCTCTCCGCCCTTGAAACCGCCATGCGCCCAACTCAGATTAGGACTCATTCTATTAGGAAAGCTCATGAGAATATTGATAAGACTTTGAAGGTTGCAGAGGTCATATTGGCTCATTTTGATCAAATTCGTCAGGCGGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAGCTATCTTCAAGCAATTGCTAAGCTGAGAAGCAACATTCAGTTTTTTGGCAGTATCAAGGGTAGTAAGAGTAGTGATGCTGTCATCAACCATGCCAATAATTTGCTTGCTAAAGCTATTTCTAAGTTAGAAAACGAGTTTAAGCAGCTATTATCATCTTACAGCAAACCAGTGGAACCTGAGCGCCTCTTTGATTGCCTTCCAAACTCAATGCGACCTTCATCAGGATCGCCTTCTCATGATGGTGATCCTAATGGCAAGAACCATTCTAATCACCATTCTGAGGCACACAACAATACTGCTGATGCTGTTGTATATACACCACCCGCTCTTATACCGCCAAGAGTTTTGCCCCTGCTACACGATTTAGCTCAGCAAATGATTGACGCTGGTCATCGACAACAATTACTCAAAATATACAGAGATGTTCGTTCCAATGTATTAGAAGAAAGCCTCCGAAAGCTCGGGGTTGAAAAACTCAGCAAAGACGATGTCCAAAAGCTACAATGGGAGATCTTGGAAGCCAAAATTGGAAACTGGATTCATTACATGCGTATAGCTGTCAAATTGTTGTTTGCTGGTGAAAGGAAAGTCTGTGATGAAATATTTGAAGGCTTTGATTCTCTCAGTGAACAGTGTTTTGCTGAGGTGACTACAAATAGTGTTTCTCTGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCGGAAAAGTTATTTGTGCTTTTGGACATGTACGAAATAATGCAAGAGCTCCAATCAGAGATCGAAACACTCTTTAAAGGGAAAGCTTGCATGGAAATAAGAGACGCTGCAATGGTTTTGACAAAACGACTTGCTCAAACTGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCGACAAAGACTGCAGTAACCGATGGAACTGTCCATCCTTTGACAAGCTATGTCATTAACTATGTGAAATTTTTATTTGACTACCGGTCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGTTACAAAGGATTCTCCACAGTTAGCATCTGTAACAATGCGTATAATGCAAGCTTTGCAAACCAATTTAGACGGGAAATCAAAGCAGTATAAAGACCTCGCATTGACGCATCTTTTTCTCATGAACAATGTTCATTATATTGTTAGATCAGTTCGTAGGTCTGACGCCAAGGATTTGCTGGGGGATGATTGGGTACAAAGACACCGGAGGATTGTTCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATCCAGGGCCTTACCTCATCAGGTGGTGGGAGTGGTGATGGTGGAAATGGAAGTAGCAGTGGTGCTTCAAGAGCAGTTGTTAAAGACAGATTTAAGACATTCAATACTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACAGCGAATTGCGAGAGTCTCTTCGGCTTGCCATTGCTGAAGTCTTGATGCCTGCCTATAGATCATTTGTGAAACGTTTCGGATCTCTAGTAGAGAATGGAAAGAATCCTCATAAGTTCGTCAAATACACAGCGGAGGATCTAGATCGAATGTTGGGTGAATTTTTCGAAGGAAAAAACATGAACGAAACGAGGCGCTAA 1953 0.4173 MGIVVAGVDDLLSDKAAKMRESLQKSQTITENVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKVAEVILAHFDQIRQAEAKILKGPHEDLESYLQAIAKLRSNIQFFGSIKGSKSSDAVINHANNLLAKAISKLENEFKQLLSSYSKPVEPERLFDCLPNSMRPSSGSPSHDGDPNGKNHSNHHSEAHNNTADAVVYTPPALIPPRVLPLLHDLAQQMIDAGHRQQLLKIYRDVRSNVLEESLRKLGVEKLSKDDVQKLQWEILEAKIGNWIHYMRIAVKLLFAGERKVCDEIFEGFDSLSEQCFAEVTTNSVSLLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELQSEIETLFKGKACMEIRDAAMVLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEVTKDSPQLASVTMRIMQALQTNLDGKSKQYKDLALTHLFLMNNVHYIVRSVRRSDAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGDGGNGSSSGASRAVVKDRFKTFNTMFEELHQKQSQWTVPDSELRESLRLAIAEVLMPAYRSFVKRFGSLVENGKNPHKFVKYTAEDLDRMLGEFFEGKNMNETRR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0891 650 MobiDBLite consensus disorder prediction 171 185 - -
Lal13g0891 650 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 646 IPR004140 GO:0000145|GO:0006887
Lal13g0891 650 MobiDBLite consensus disorder prediction 166 197 - -
Lal13g0891 650 Gene3D Exocyst complex component Exo70 76 182 - -
Lal13g0891 650 Gene3D Exocyst complex component Exo70 185 650 - -
Lal13g0891 650 SUPERFAMILY Cullin repeat-like 78 641 IPR016159 -
Lal13g0891 650 Pfam Exo70 exocyst complex subunit 280 637 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal13g0891 650 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0891 Lal-Chr13 6130893 6142123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0891 10 650 EXO70 exocyst subunit family AT5G03540 74.401 0.0 975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0891 K07195 - gmx:100813987 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0891 13 6130893 6142123 Lal13g0891 13 6130893 6142123 ECH
Lal12g0785 12 6103806 6112407 Lal13g0891 13 6130893 6142123 LSH
Lal13g0891 13 6130893 6142123 Lal24g0704 24 5243398 5252627 LSH