Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0890 ATGGGGTACCTCTTATTGCTTCTATGCTTTTCTTTTTCTTCTACATTGTTATATGCTGTTTCTGCTTTGAACCCTGATGGATTGAGTCTTTTGTCTCTCTTGAGCCACTGGAATAATGTTCCTAGTGACATAAACTCTACTTGGAAGGCCTCTGATTCCATTCCATGTTCATGGGCAGGAGTGAAATGCAATGATGCCAACAATGTTGTTTCTCTTAATCTCAGTGAATATTCCATTTTTGGTCAATTGGGACCTGAAATTGGACACTTGAGTCACTTGCAAACCATAGATTTGTATGCTACTGGTTTCTCTGGAGAAATTCCCTTAGAACTAAGTGATTGTAGCATGCTTCAGTATTTGGATCTTTCTTTAAACAACTTTAGTGGAGGAATACCTGAGAGCTTCAAAGACTTGCAAAACTTGAAGTACATGGCCATGATTTCTAATCAGCTTTCTGGTGAAATTCCTGAATCATTGTTTCAAATTCCTCACCTTGAAGAATTGCACCTTAATAACAACAGTTTAAATGGTTCCATTCCCACAAGTATTGGCAACATGACTCAGCTTGTGGTGCTGGATCTAAGTGCTAATGAGTTGTCAGGGACAGTTCCAATATCCATTGGAAACTGTAGTAAACTAAAGCTTCTTGATTTGGATACCAATCTCCTGCAAGGAGTTCTTCCTTCTAGTCTAAACAATCTCACAAATCTTGACACTTTATATCTCTTTGGTAATGAGTTTGTAGGAACCATTCCTTTGGGATCTGGAAATTGCAAAAAGTTATCAATTCTGAGTCTTTCTTACAATGCATTCAACACAAGTATTCCACCACGCTTGGGGAACTGTAGTGGTTTAACAGAGTTTTATGCTGCACAAGCTAATTTAGTTGGCACTATACCATCCACTTTAGGTCTCCTAAACAAACTTTCTGTTCTAATGCTTTCTGAGAACCAATTATCTGGGAAAATCCCTCCACAGATTGGTAATTGCAAGTCATTAGATACATTACATTTGTACTCCAATGCACTTGAGGGGGAAATTCCTAGTGAATTAGGAAACTTGAGTAAATTGCATGATCTTAGGTTGTATCAGAACTTTTTGATAGGGGAAATTCCACTTAGCATATGGCAAATTCAAAGCCTTGAGCATGTCCTTTTGTACAATAATAGCCTTTCTGGAGAGCTACCTCTAGTTATGACACAGCTCAAATTTCTTCAAAATATCTCATTGTATAACAACGACTTCACCGGAGTCATACCGCAAACCTTAGGAATTAATAGCAGCTTAGTGCAGCTTGACTTTATGTTCAATAGTTTTACTGGTACCCTCCCACCAAATCTTTGTTTTGGAAGCAGATTAGTGAGGCTCAATATGGGTTTCAATCAATTTCATGGTAGCATACCTCCTGATGTAGGAAGATGTACAACTCTTACAAGGGTAAGACTTGAAGAGAATAATTTTACTGGGCCTCTACCTGATTTTGAATTTAATCCAAATATCTCATACATGAGCATCAATAGCAATAATATCAGTGGAGCAATTCCATCAACTTTGGGAAACTGCACAAATCTTTCCTTTTTAAACTTGTCCATGAACAAGTTTATAGGTCTTGTACCCTCAGAGCTAGGAAACCTTGTGAATCTTGAGATTTTGGATCTTTCTCACAATAACTTGGAAGGTGCTTTGCCACATGAGCTATCAAACTGCAACAAAATGGGAAGGTTTGATGTGGGATTCAATTTCTTAAATGGTTCCTTTCCATCAAGTCTGCAAAACTGGACAACACTGACCACTTTGGTTCTCAGAGAGAATAATTTTGGTGGTGGTATCCCAGATTTCTTGTCAGATTATGAAATGCTTTCTGAGTTACATCTTGGTGGAAATGTCTTTGGTGGTAATATTCCTAGATCAATTGGAGGATTGCAGAATCTTCTATATGGCTTAAACCTAAGTGCCAATGGGTTGATAGGCGAGTTTCCAGAGGAGATAGGAAACCTGAAGCATCTACTAGCACTGGATTTATCTTGGAACAATTTGACAGGAAGCATACAAGTTCTTCATGAGCTCAGTTCATTATCTGAATTCAACATTTCACACAATTCTTTTGAAGGTCCTGTACCGGCATATCTGATCAAGCCAAATTCTTCTCTATCATCATTTCTGGGTAATCCTGGACTATGTGTCAGTTTTTCATCATCACATGTGCTGAATTCCACTGAAAGAAGCTATTTAAGACCATGTGAGACACAAAAATCAAAAGGCCTTAGTGCTGTTGCAATTGTGATGATAGCACTTGGAAGCTTCATAATTGTTGTTTTTCTGTTGGGACTAGTTTATATATTTTTTATCAGAAAACTTAAGCAGAAAACCAAAGGGCCAGATGAAGAGAACGCTTCAGAACTTCTCAACAAGGTGATGGAAGCAACAGACAACCTGAATGATGAGTACATTATTGGAAGAGGAGCCTATGGAGTTGTTTATAAAGCTGCATTGGGTACAGACAAAATTGTTGCTGTGAAAAGGGTTCTATATGCTCAGAACAAAGGGAAAAGGATAAGCATGCTGAGAGAGATTGAAACCCTTGGAAAGATTCGGCATCGAAATTTGGTGAGATTGGAAGACTTTTATCTAAGAGAAAACTATGGTCTAATCATGTACACATACATGCCAAATGGAAGCCTTCATGATGCTTTGCATGAGAAGAATCCACCACAACACTTGGAGTGGAGTATCAGGTATAGGATAGCTCTTGGAGTTGCTCATGGATTGGCTTACCTCCATTTTGACTGTGATCCTGTCATAGTGCACCGCGACATCAAACCGAGCAATATACTTCTAGATTCTGAAATGGAGCCTCATGTAGGAGACTTTGGTGTTGCTAAGCTTTTGGATCCTACTTCTATCTCAACACAGTCAATATCAATTACTGGTACAACAGGCTATATTGCACCAGAAAATGCTTATACAACAAGAAAGGGCAAGGAGTCTGATGTGTACAGTTATGGGGTAGTTTTGCTGGAGCTGATATCCAGAAAGAAGGCATTGGATCCTTCATTTATGGAAGGAACGGATATTGTGTATTGGGTTAGATCTGTGTGGGAGGAAACAAGAGCCACTAAGGCAATTGTTGATTCAATGCTTTTTGATGAAATTTCAGATGACAATGTAATGAGACAAGTTGACAAGGTACTATTGGTGGCTTTGAGATGTACAGAAAATGATCCACATAGGAGACCAACAATGAGAGATGTTGTCATGCTTTTGGAGAAGAAAACCACTGCATAA 3285 0.386 MGYLLLLLCFSFSSTLLYAVSALNPDGLSLLSLLSHWNNVPSDINSTWKASDSIPCSWAGVKCNDANNVVSLNLSEYSIFGQLGPEIGHLSHLQTIDLYATGFSGEIPLELSDCSMLQYLDLSLNNFSGGIPESFKDLQNLKYMAMISNQLSGEIPESLFQIPHLEELHLNNNSLNGSIPTSIGNMTQLVVLDLSANELSGTVPISIGNCSKLKLLDLDTNLLQGVLPSSLNNLTNLDTLYLFGNEFVGTIPLGSGNCKKLSILSLSYNAFNTSIPPRLGNCSGLTEFYAAQANLVGTIPSTLGLLNKLSVLMLSENQLSGKIPPQIGNCKSLDTLHLYSNALEGEIPSELGNLSKLHDLRLYQNFLIGEIPLSIWQIQSLEHVLLYNNSLSGELPLVMTQLKFLQNISLYNNDFTGVIPQTLGINSSLVQLDFMFNSFTGTLPPNLCFGSRLVRLNMGFNQFHGSIPPDVGRCTTLTRVRLEENNFTGPLPDFEFNPNISYMSINSNNISGAIPSTLGNCTNLSFLNLSMNKFIGLVPSELGNLVNLEILDLSHNNLEGALPHELSNCNKMGRFDVGFNFLNGSFPSSLQNWTTLTTLVLRENNFGGGIPDFLSDYEMLSELHLGGNVFGGNIPRSIGGLQNLLYGLNLSANGLIGEFPEEIGNLKHLLALDLSWNNLTGSIQVLHELSSLSEFNISHNSFEGPVPAYLIKPNSSLSSFLGNPGLCVSFSSSHVLNSTERSYLRPCETQKSKGLSAVAIVMIALGSFIIVVFLLGLVYIFFIRKLKQKTKGPDEENASELLNKVMEATDNLNDEYIIGRGAYGVVYKAALGTDKIVAVKRVLYAQNKGKRISMLREIETLGKIRHRNLVRLEDFYLRENYGLIMYTYMPNGSLHDALHEKNPPQHLEWSIRYRIALGVAHGLAYLHFDCDPVIVHRDIKPSNILLDSEMEPHVGDFGVAKLLDPTSISTQSISITGTTGYIAPENAYTTRKGKESDVYSYGVVLLELISRKKALDPSFMEGTDIVYWVRSVWEETRATKAIVDSMLFDEISDDNVMRQVDKVLLVALRCTENDPHRRPTMRDVVMLLEKKTTA 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0890 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Lal13g0890 1094 SMART LRR_typ_2 306 330 IPR003591 -
Lal13g0890 1094 SMART LRR_typ_2 666 693 IPR003591 -
Lal13g0890 1094 SMART LRR_typ_2 259 282 IPR003591 -
Lal13g0890 1094 SMART LRR_typ_2 545 569 IPR003591 -
Lal13g0890 1094 SMART LRR_typ_2 186 210 IPR003591 -
Lal13g0890 1094 SMART LRR_typ_2 162 185 IPR003591 -
Lal13g0890 1094 SMART LRR_typ_2 234 258 IPR003591 -
Lal13g0890 1094 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Lal13g0890 1094 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 2 1085 - -
Lal13g0890 1094 Pfam Protein kinase domain 815 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0890 1094 PRINTS Leucine-rich repeat signature 189 202 - -
Lal13g0890 1094 PRINTS Leucine-rich repeat signature 545 558 - -
Lal13g0890 1094 Gene3D Transferase(Phosphotransferase) domain 1 889 1094 - -
Lal13g0890 1094 ProSitePatterns Protein kinases ATP-binding region signature. 818 840 IPR017441 GO:0005524
Lal13g0890 1094 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1085 - -
Lal13g0890 1094 SUPERFAMILY RNI-like 408 716 - -
Lal13g0890 1094 Gene3D Ribonuclease Inhibitor 28 145 IPR032675 -
Lal13g0890 1094 SUPERFAMILY Protein kinase-like (PK-like) 803 1089 IPR011009 -
Lal13g0890 1094 SUPERFAMILY RNI-like 71 441 - -
Lal13g0890 1094 SMART serkin_6 812 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0890 1094 Gene3D Ribonuclease Inhibitor 403 735 IPR032675 -
Lal13g0890 1094 Gene3D Phosphorylase Kinase; domain 1 785 888 - -
Lal13g0890 1094 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Lal13g0890 1094 Pfam Leucine rich repeat 498 558 IPR001611 GO:0005515
Lal13g0890 1094 Pfam Leucine rich repeat 188 246 IPR001611 GO:0005515
Lal13g0890 1094 Gene3D Ribonuclease Inhibitor 146 254 IPR032675 -
Lal13g0890 1094 ProSiteProfiles Protein kinase domain profile. 812 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0890 1094 Gene3D Ribonuclease Inhibitor 256 402 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0890 Lal-Chr13 6121028 6127703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0890 14 1089 Receptor kinase-like Gene Family AT1G73080 52.059 0.0 1051
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal13g0890 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0890 - - gmx:100817655 1481.08