Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0886 ATGAACAACAACGTGGACAATGGTTTTGATGCAAGTGGGTTCACATATGGTGTAGCATTCGTGGTTGGTTTAATCTTCACAGTTTTAGTAATAGTTTTTGCATGTGTGCGCCTTCGTATGTCTCAAAACCCTAATATACTAAACATTTTGGCTGGTTCTCATAGAGAAGAAGAAACCTTAGTTGAGATGGAACAAGGTCTTCATCACATTCAAAGTACAACAAGTTTTGAAAGCTTCCCAAAACTACTATACTCTGAAGTGGTGCAGAATAAAGGTGGTTCAAATATTTATTCAAGTTGTTCTATTTGCTTAGGGGATTACAAAGAAAGTGACATGTTAAGGTTGCTTCCTGGCTGTGGCCATCTTTATCACCTTAATTGTGTTAATCCATGGCTAAGGTTACATTCAACTTGTCCCATATGTCGAAAAACTTCTGATCAATATCATAATTCAATTGCCTCTAATATTGACGGGTAA 477 0.3669 MNNNVDNGFDASGFTYGVAFVVGLIFTVLVIVFACVRLRMSQNPNILNILAGSHREEETLVEMEQGLHHIQSTTSFESFPKLLYSEVVQNKGGSNIYSSCSICLGDYKESDMLRLLPGCGHLYHLNCVNPWLRLHSTCPICRKTSDQYHNSIASNIDG 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0886 158 SUPERFAMILY RING/U-box 78 148 - -
Lal13g0886 158 CDD RING-H2_PA-TM-RING 100 142 - -
Lal13g0886 158 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Lal13g0886 158 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 148 IPR045899 -
Lal13g0886 158 Pfam Ring finger domain 99 142 IPR001841 -
Lal13g0886 158 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 148 - -
Lal13g0886 158 SMART ring_2 100 141 IPR001841 -
Lal13g0886 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 147 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0886 Lal-Chr13 6109123 6109599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0886 13 144 C3H Transcription Factor Family AT5G06490 35.526 6.22e-26 95.9