Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0885 ATGAACATGTTGCTATATCAAAAACCTTTTGTTCTCACATTTTTAGCATTGTTTATAACATGTTTATGTCACTGTTCTGCTACTCCATTCATAGTGGGAGATTCATCAGGCTGGGTTATTCCACCATATCCATCTTACTACAGTAACTGGGCACATTCCCATCTCATGAGAGTGGGTGATTCTCTAGAATTCCACTTCTACCACAAATTGTACAACCTAGTTCAGGTAAGACAAAATGACTATGATCATTGCACAACACTTGAGCCTGTGGAGATATTCAATAGCAGCCCAGCAATTATTCCTTTGAAGGAAAAAGGTAAATTGTTCTTCACATGCACAATCTCTAACTATTGTTCTCTAGGCCAGAAAGTTGCTATTACTGTCCATGAATATATTCCTCCATGTCCACCAACACCAACACCATCACCACCACCACCACCAACACCATCACCACCATCGCCATCGCCATCGCCAACACCATCACCACCACCGCCATCGCCATCACCATCACCATCACCATCGCCTTCTCAAGCACCATTATCACCAAATGGTTCTGCTCCAGCACCTAGCATAAGCCCTGTGCCACCACCTGATTCTCCTACTCCAGGAGGTAATAATAGTGATGGGAATTCTCCTGTGCCAGAATCTTCTGATCAAGGGGACAAGTCTAGTGCAGTGGCATTGGTTTATAGGACAAGTACTTTCAATGTTTCTATGTGGAAATTCTTATCTTTCTTTGGTAGTTTCTTGGTATTTTGGATGGTTTAA 768 0.4245 MNMLLYQKPFVLTFLALFITCLCHCSATPFIVGDSSGWVIPPYPSYYSNWAHSHLMRVGDSLEFHFYHKLYNLVQVRQNDYDHCTTLEPVEIFNSSPAIIPLKEKGKLFFTCTISNYCSLGQKVAITVHEYIPPCPPTPTPSPPPPPTPSPPSPSPSPTPSPPPPSPSPSPSPSPSQAPLSPNGSAPAPSISPVPPPDSPTPGGNNSDGNSPVPESSDQGDKSSAVALVYRTSTFNVSMWKFLSFFGSFLVFWMV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0885 255 Pfam Plastocyanin-like domain 45 122 IPR003245 GO:0009055
Lal13g0885 255 MobiDBLite consensus disorder prediction 138 202 - -
Lal13g0885 255 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
Lal13g0885 255 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
Lal13g0885 255 PRINTS Proline rich extensin signature 127 139 - -
Lal13g0885 255 PRINTS Proline rich extensin signature 142 158 - -
Lal13g0885 255 PRINTS Proline rich extensin signature 162 174 - -
Lal13g0885 255 PRINTS Proline rich extensin signature 175 196 - -
Lal13g0885 255 MobiDBLite consensus disorder prediction 138 222 - -
Lal13g0885 255 Gene3D - 28 133 IPR008972 -
Lal13g0885 255 PANTHER BLUE COPPER PROTEIN 8 134 IPR039391 GO:0009055
Lal13g0885 255 PANTHER OS03G0648500 PROTEIN 8 134 - -
Lal13g0885 255 MobiDBLite consensus disorder prediction 203 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0885 Lal-Chr13 6106640 6109675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0885 4 188 Phytocyanin Superfamily AT4G28365 31.053 3.94e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0885 - - gmx:102662708 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0885 13 6106640 6109675 Lal24g0700 24 5225808 5227109 LSH