Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0873 ATGGGTAAGTATATGAACAAAACCAAACCCAAAATCGAAAAACAACTCTCACTTTTTGACCCAAACACCTACTTCGGTGTTAGAACTCGTGCTAAAACCCTAGCTCTTCGTAATTCCCAATTCTCTTCCATTTCTGGAGGCTCCTACCTTCAACTACGCAGCCGCAGGCTCCACAAGCCTCCCATTTCTATTCCCTCCCATGATTCTTCTTCTAAGCGTCACAAGCTTCAAAACCCTAAATCCCCAATTATAAACCCTAGTTCCGGTTCCAGGCTTCGTAATGGCTCTGTTGTAGATTCGGGTGAGCTGGAGAAGGAAGAGGTGAAGGGAATCGTGCATGAGAATGTTGATGATGTTGCTGTTGACGAAACTTCGTGTGGGGAAAATTGCTTGGATTTTGAAGGTAGAGAGAGAAACACTAGGGAATCAACACCTTGCAGTTTGATAAGGAACCCAGACGCTATCAGGACCCCTGGTTCAACTACCAGGCCTACTCGTTCAACTGATCAAAGAACGGAGCAACCAGCTAGAAGGCAAATCCCAACTGCGCATGAAATGGATGAATTCTTTGCTGAAATGGAAGAGACTCAACAAAGGCAGTTCATTGAGAAGTACAACTTCAATCCTGTGGATGATAAGCCGCTACCCGGGCGTTATGAATGGGAAGAATTAAAATCCTAG 681 0.4493 MGKYMNKTKPKIEKQLSLFDPNTYFGVRTRAKTLALRNSQFSSISGGSYLQLRSRRLHKPPISIPSHDSSSKRHKLQNPKSPIINPSSGSRLRNGSVVDSGELEKEEVKGIVHENVDDVAVDETSCGENCLDFEGRERNTRESTPCSLIRNPDAIRTPGSTTRPTRSTDQRTEQPARRQIPTAHEMDEFFAEMEETQQRQFIEKYNFNPVDDKPLPGRYEWEELKS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0873 226 Gene3D p27 170 226 IPR044898 -
Lal13g0873 226 MobiDBLite consensus disorder prediction 142 185 - -
Lal13g0873 226 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 1 222 - -
Lal13g0873 226 MobiDBLite consensus disorder prediction 154 169 - -
Lal13g0873 226 MobiDBLite consensus disorder prediction 170 185 - -
Lal13g0873 226 Pfam Cyclin-dependent kinase inhibitor 180 224 IPR003175 GO:0004861|GO:0005634|GO:0051726
Lal13g0873 226 PIRSF CKI_KRP_plant 1 226 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lal13g0873 226 MobiDBLite consensus disorder prediction 204 226 - -
Lal13g0873 226 MobiDBLite consensus disorder prediction 59 103 - -
Lal13g0873 226 MobiDBLite consensus disorder prediction 76 95 - -
Lal13g0873 226 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 222 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0873 Lal-Chr13 5979061 5981535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0873 1 225 Core Cell Cycle Gene Families AT5G48820 39.382 1.38e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0873 - - adu:107466581 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0873 13 5979061 5981535 Lal24g0679 24 5044777 5047485 LSH