Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0866 ATGTATTCTTTGAAGGACAAAGTCACAGACAAACTTTCCCATCTGCTTCCCAATTCCAATTCCAACTCCTCACCCCAGGCTAATCCCTGCTCTAAAGAAGGTAAATCTTTGTCATCATATTTATCTTACGTTATACCTTCAATAGGCTTTGGTGGATCCAAGACAAACAAGCATCAACATGATCCGATTCCATCAGATTCAGATGAATATAATTATGAGAAAATTGAAAATCAGGATGGCAAATTGGATAATTATGTTGATTGTAGTCCCCCATGTAATAACATGGATTTATTAAAAAATGATATTATTGGTGAAGATCAGACATCTAGAAGGAGCAGTAGCAGTTCTGAAGTTTTCGAAGAAGCAAATGAGCAGCAAACTCCAAATAATTCGAACAAGTCTCTACTGAATCTTACTGATGACTCTACTTTTATTTCTCCTGAGTTGTATGAATTTTTCGAATCATGCCTTCCCAACATAGTAAAAGGGCGTCAATGGGTCTTACTTTATAGCACACTGAAAGATGGAACATCACTTCGTACACTTATTCGCAAGAGTGCTGAACTTTCTTCTCCTGGCTTGCTGATTGTTGGAGATAGGAAAGGTGCTGTTTTTGGCGGCCTGTTAGAATGCCCCTTGAAACCTACACCAAAGCGAAAATATCAAGGGACAAACCAAACCTTTGTCTTTACAACTATATATGGTCAGCCAACGCTGTTTCGACCTACCGGTGCCAACCGGTACTACTATATGTGTTTGAGTGACTTACTTGCAATTGGTGGTGGCAGTAATTATGCCTTATCCTTAGATGAAGATCTGTTAACTGGAACTAGTGGACCTTGCGACACATTTGGAAACAATTGTCTGGCTCATAGTCCGGAGTTTGAGTTGAAGAATGTCGAGTTGTGGGGTTTTAGACACGGTTCCTCCCCTTCGCGAGGCTAA 945 0.4011 MYSLKDKVTDKLSHLLPNSNSNSSPQANPCSKEGKSLSSYLSYVIPSIGFGGSKTNKHQHDPIPSDSDEYNYEKIENQDGKLDNYVDCSPPCNNMDLLKNDIIGEDQTSRRSSSSSEVFEEANEQQTPNNSNKSLLNLTDDSTFISPELYEFFESCLPNIVKGRQWVLLYSTLKDGTSLRTLIRKSAELSSPGLLIVGDRKGAVFGGLLECPLKPTPKRKYQGTNQTFVFTTIYGQPTLFRPTGANRYYYMCLSDLLAIGGGSNYALSLDEDLLTGTSGPCDTFGNNCLAHSPEFELKNVELWGFRHGSSPSRG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0866 314 Pfam TLD 168 305 IPR006571 -
Lal13g0866 314 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 309 - -
Lal13g0866 314 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 1 309 - -
Lal13g0866 314 MobiDBLite consensus disorder prediction 51 70 - -
Lal13g0866 314 MobiDBLite consensus disorder prediction 13 33 - -
Lal13g0866 314 ProSiteProfiles TLDc domain profile. 143 306 IPR006571 -
Lal13g0866 314 MobiDBLite consensus disorder prediction 107 135 - -
Lal13g0866 314 MobiDBLite consensus disorder prediction 1 33 - -
Lal13g0866 314 MobiDBLite consensus disorder prediction 103 135 - -
Lal13g0866 314 SMART 109ultra 142 306 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0866 Lal-Chr13 5919366 5925143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0866 165 309 EF-hand Containing Proteins AT5G06260 25.806 2.44e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0866 - - gmx:100812871 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0866 13 5919366 5925143 Lal13g0866 13 5919366 5925143 ECH
Lal12g0748 12 5670492 5681799 Lal13g0866 13 5919366 5925143 LSH