Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0865 ATGTTGTTCACATCATTGCTTCTATATCACTGGCTGCAGGATGAAATTTCAATCCCAATTAGTGATCAAATTTTGGAGCTATGTGAATCTGAATTGTTTTCAGAGCCTCTACAGAATTCTGAAGTTACTTCCAGCTCAAATTGTTGCTATGATGAAAACTCCTCATATTTGACAAATATAACTCTAGCTTTAGATATAGACACTAAGTTGAATAGCCATAGCAATAATACAGTGACCACCCCAACTAGCACCACCACCACTACTACTACCGCCGCCAACAACAACACAACCAATAGCAGCAATCTTTCAATTATCTTTGACTCACAAGAAGAAATTGACAATGACATATCTGCCTCAATAGACTTATCATCATCCCAAAGTTTCAATGTTCCACAATTTCTCCAAAGCCAGCAAGAACAGTTTGGAAATTTCTCTTGTATGCAGCAGCCTAATGTGCAGCAATTAGCAGCATGTAATTCAGGTGTGGAAGGCTTCTCTCAGTATTCCACTGACCCTGTTGCACCACTTATGCAAGCTCCATTACCTTCTGTTTTTGAAGAGGATTGCATATCTTCTGTTCCTTCTTATATGCCTCTCAACCCTTCTTCCCCTTCTTGCAATTTTCTTGGTCCTGGCATGGGACAATACATGCCTCAATGCCCTCTTGCTACTGCCTTGTCTGCTGACCGTTCTGGATTGTTCGGTGCGAGTATGCTTCTTGGTTCCGAACTTCAGGCACAAGAACATGAATACCAAGCAGAGAATGGTGGTATGTTTTGTACAGATTCGATGCCGCGGGTGTTTAACCCTCCAGATTTTCAGGCACTTGGTGTTGTTGAGAGTCAGCAACTAGTAGTTGGTGCTGGGAGTTCTGCCACTTTGACACCAGAAATCTCAACCTTGGAAGACTCTACCTTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCAGAAAAACTCTAGCAGATAGTCGACCTCGGGTTAGAGGAAGATTCGCAAAGAACGATGATTTTGGTGATACACATAATAATCATAGATCTACTAGTAGCAATCATGAAGATGATGATGATGAAGAAGTTGTGGTTAAAGAAGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATTAGTGGAGTAAACTCCTTCAAATGCAACTATTCAATCCAATCATGGATTTGA 1254 0.4011 MLFTSLLLYHWLQDEISIPISDQILELCESELFSEPLQNSEVTSSSNCCYDENSSYLTNITLALDIDTKLNSHSNNTVTTPTSTTTTTTTAANNNTTNSSNLSIIFDSQEEIDNDISASIDLSSSQSFNVPQFLQSQQEQFGNFSCMQQPNVQQLAACNSGVEGFSQYSTDPVAPLMQAPLPSVFEEDCISSVPSYMPLNPSSPSCNFLGPGMGQYMPQCPLATALSADRSGLFGASMLLGSELQAQEHEYQAENGGMFCTDSMPRVFNPPDFQALGVVESQQLVVGAGSSATLTPEISTLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTHNNHRSTSSNHEDDDDEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0865 417 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 13 417 - -
Lal13g0865 417 MobiDBLite consensus disorder prediction 351 382 - -
Lal13g0865 417 Pfam CCT motif 316 358 IPR010402 GO:0005515
Lal13g0865 417 MobiDBLite consensus disorder prediction 73 94 - -
Lal13g0865 417 MobiDBLite consensus disorder prediction 351 376 - -
Lal13g0865 417 ProSiteProfiles CCT domain profile. 316 358 IPR010402 GO:0005515
Lal13g0865 417 PANTHER CCT MOTIF FAMILY PROTEIN 13 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0865 Lal-Chr13 5910745 5913797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0865 296 360 C2C2-CO-like Transcription Factor Family AT5G24930 41.538 5.59e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal13g0865 CCT 5.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0865 - - aprc:113871720 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0865 13 5910745 5913797 Lal13g0865 13 5910745 5913797 ECH
Lal13g0865 13 5910745 5913797 Lal24g0673 24 4999051 5002412 LSH