Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0842 ATGGCGAAGGACGAATTGAACGTGCTTAATGCTCTTGATGTAGCAAAGACACAATGGTACCATTTCACAGCCATTGTGATTGCTGGCATGGGTTTCTTCACTGATTCCTATGACCTTTTCTGCATTTCCCTTGTCACAAAATTGCTTGGTCGTATATACTTTTACGAAGAAGGTTCCAACAAGCCAGGTTCTCTTCCATCAAATGTTGCTGCTGCCATCAATGGTGTTGCATTATGTGGCACCCTTGCAGGCCAACTTTTCTTTGGTTGGCTTGGTGACAAAATGGGAAGGAAACGTGTTTATGGGATAACACTTATGCTCATGGTTATATGCTCAATAGCCTCTGGTCTATCTTTTAGCAAAGATCCTAAAGCTGTTGTTATCACACTTTGCTTCTTCCGTTTCTGGCTTGGATTTGGAATTGGTGGTGATTACCCTCTTTCAGCTACAATCATGTCTGAGTATGCCAATAAGAAGACCCGTGGAGCATTTATAGCTGCAGTTTTTGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGCATGGTTGCAATCATAGTTTCATCACTTTTCAGTTCCTATTATCCTGCTCCACCATTTAGTGTTGATCCAGTTTTGTCCACAATCCCACAAGCTGATTATGTGTGGAGGATAATCTTGATGTTTGGTGCACTCCCAGCACTTCTTACATTCTATTCCAGGATGAAAATGCCTGAAACTGCAAGGTACACTGCTTTAGTTGCCAAGAATGCTAAGCAAGCAGCTGAAGATATGTCAAAAGTCTTGCAGGTTGAGATAGTAGCTGAACCAGAGAAGATTCAGGAATTGGAGAAACGAAGAGGGAATGATTTTGGGTTGTTTACAACACAGTTCTTTTGCCGCCACGGCCTTCACTTGCTTGGAACAGCCACTACATGGTTCCTGTTGGACATTGCCTACTATAGTCAGAATCTATTCCAAAAGGATATTTTCAGTGCAATTGGTTGGATTCCAGCAGCAAAAACCATGAGTGCCCTTGAAGAGTTATTCAAAATTGCTAGAGCACAAACCCTAATAGCACTTTGCAGCACTGTGCCTGGATACTGGTTCACTGTGGCACTTATTGATAGAATGGGAAGGTTTAAAATTCAGCTGATGGGATTTTTCTTCATGACAGTGTTCATGTTTGGTTTGGCCATTCCATACCATCATTGGACATTGAATGGAAATCAAATAGTGTTTGTTGTGTTGTACTCATTTACCTTCTTCTTTGCCAACTTTGGTCCAAATGCCACCACATTTATAGTACCTGCAGAGATATTCCCAGCAAGGTTAAGGTCAACATGTCATGGCATATCAGCAGCTGCAGGGAAAGCTGGTGCAATAGTAGGAGCTTTTGGCTTTGTGTATGCTCAAACTACTATTGGAGTGAGATATACTCTTATTATTTTGGGTGTGATTAACTTCTTTGGAATGATGTTTACATTCTTGGTGCCTGAACCAAATGGAAAATCATTGGAAGAGATGTCTGGTGAAGCTGAGGAAGAGACTACTGCTACTACAGAATCAACATTGGAGGCTGGTCTTCATGTTAGGACTTAG 1578 0.417 MAKDELNVLNALDVAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRIYFYEEGSNKPGSLPSNVAAAINGVALCGTLAGQLFFGWLGDKMGRKRVYGITLMLMVICSIASGLSFSKDPKAVVITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSSLFSSYYPAPPFSVDPVLSTIPQADYVWRIILMFGALPALLTFYSRMKMPETARYTALVAKNAKQAAEDMSKVLQVEIVAEPEKIQELEKRRGNDFGLFTTQFFCRHGLHLLGTATTWFLLDIAYYSQNLFQKDIFSAIGWIPAAKTMSALEELFKIARAQTLIALCSTVPGYWFTVALIDRMGRFKIQLMGFFFMTVFMFGLAIPYHHWTLNGNQIVFVVLYSFTFFFANFGPNATTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFVYAQTTIGVRYTLIILGVINFFGMMFTFLVPEPNGKSLEEMSGEAEEETTATTESTLEAGLHVRT 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0842 525 Gene3D MFS general substrate transporter like domains 20 519 IPR036259 -
Lal13g0842 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 515 - -
Lal13g0842 525 CDD MFS_PhT 25 493 - -
Lal13g0842 525 TIGRFAM 2A0109: phosphate:H+ symporter 11 504 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lal13g0842 525 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 4 515 - -
Lal13g0842 525 SUPERFAMILY MFS general substrate transporter 11 502 IPR036259 -
Lal13g0842 525 Pfam Sugar (and other) transporter 25 502 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal13g0842 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 495 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0842 Lal-Chr13 5755489 5757066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0842 1 503 Inorganic Solute Cotransporters AT2G38940 75.581 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0842 K08176 - gmx:100792711 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0842 13 5755489 5757066 Lal13g0842 13 5755489 5757066 ECH
Lal13g0842 13 5755489 5757066 Lal24g0658 24 4846906 4848519 LSH