Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0832 GAATCCATTTCAATAGCCATCTCCATTCTGAAAAACATTATGATGTCTATCCCTGAAAAACTTTATGATGTTTTCATCAGTTTCAGAGGTGAAGACACGCGCAGAAACTTCACTAGCCATCTCCATTCTGAACTTATTGACGTTAACATGTGGACTTACACAGATAATAACCTTTCAAAAGGACACGAAGTGTGGCCAGCACTTTGTAGTGCAATTCATAACTCACATATAGCTATTGTTGTTTTCTCCAGAAACTATGCTACTTCCAAATGGTGCTTGAAAGAGCTTGTCAAAATACTAGAATGTAGAAAGAGTGAAGGATTAGTAGTAATACCTGTCTTCTATAGAGTTGATCCATCTGATATCAGGAATCAGAGGGGGAGTTATGGTGAAGCATTTGCTAAACATGTTAGAGGTATCAATGACAAAGGTATGGAAGATTTTGTTGAAAATGAAAACCAAGTTTCTCTGTGGAAATCTGCTCTCACTGAAGCTGCAAATATATCTGGATGGGACTCTTGTAGTCGTGACTATAAGAACGATTCTCAACTCATCAAGAAAATTGTCAAAGATGTGGAAGAAAAGAGGAACATAGTGTCCCCTTATGAAGTAGGAGGAGAAATAGAAGACCTTGTAGGAATTGACAAATTATGTGAAGATGTCAAATTGTTGCTAGCAAAAGAACAGAAAACAAATTGGTTACTAAAAAATGGTCAAGTAATTGGAATTTGGGGAATGGCAGGGATTGGCAAGACTACCATTGCTAAAGCTGTGTTTTGTGAATTCTTTCCCCAATATGACAGTGTTTGCTTCTTGTCAAATGTAAGAGAAGAATCGAAAAGACTCGGACTAGCAGATTTACATGATAGGCTTCTTTGTGAGTTACTAAAGGATGAAAATCCCAAGTCCACATTCATTAAGAGGAAGCTCCATAATAAAAAAGTTTTCATTGTACTTGATGATGTGGATAGTGCAGATCAAATAGATGAGTTATGTAGAGAATGTAAATATGCAGGTCCAGATAGTAAACTCATTATAACAACAAGAAATAAGCATTTGCTCACTGCAAGAGTTGACGAGGATTCTATCTATGAGGTCAAAACTTGGAGCTTTGACAAATCTATGGAGCTTTTTAGCATGCATGCATTCAAGAGAAAGTACCATCAAAAGGGTTATGAGGATCTTTCAAAAAGGGCAGTTGAATATGCAGGGGGGCTCCCATTAGCTTTAAAAGTTTTAGGTTCAAATCTTCATTCAAGAACTGCTGAATTTTGGGACAGTGAATTGAGAAAGCTCATCACTGATCCCAATGACAAAATTCAAAACGTATTACAAGTGAGCTATGATGGATTAAATAGGCTAGAGAAAAAAATATTTCTAGACATTGCGTTCTTTTTCAAAGACGAGCGTAAAGATTTTGCTCTAAGGGTACTAAATGCTTGTGGCTTCCATGCTACTAGTGGAATGAAGGTCCTTGAAGATAAAGCTCTTATAACTATTTCAAATAGAAGGAGAATACAAATACATGACTTGCAACAAGAAATGGGTTTGAAAATAGTTCGTCAAGACATTGAAGATCCTGGAAAGCGCAGTCGGTTAAGGGATATTGAAGAAGTTTCTGATGTACTTGAAAATAAAAAGGGGAGTGATGCAATTGAAGGCATAAAACTAGATCTATCAGAAATTGATGATTTCCATTTGAATGCTGACACATTCAACATGATGACTAATTTAAGATTTCTTATATTGTATGTCCCATTGGGTAAGAGATCAGGACATGTGGAGTATCCTAGAGTCTTTAATAAGTTTCCTGCTAAATTGAGGTATCTTGAGTGGCATGGATACCATTTGAACTCTCTTCCACCAACTTTCAATGCTAAGATGCTTGTTGAGATTCGCATGCCGTGCAGCAATATTTTAGAACTTTGGTGGGGTGTGAAGGATGTTCCGAATTTAGTAAGGATTGATTTAAATGAATGCAAACAGTTGAAGAATCTACCAGATTTGTGTAAAGCAACAAAACTTCAATGGCTGAATCTATCTGGTTGTGAAAGTTTGCGAGATGTTCATCCGTCTATTTTATCTCTTGACACTCTTGAAACTTTGATAGTGGATAACTGTAAAAAACTGAAGTGTCTTAAAGGTGAGAGGCATTTAAAATCTCTTCATACGATTAGTGTCAATGGTTGCACAAATCTCAAGGAATTTGCAGTGACATCTGATTCAATGACAAAGTTGGATTTAAGAAATACAGGAATTGAAAAGCTGAACTCATCAATTGGGCGTCTAACAAGACTTACATGGCTCAATCTAGAGGGTCTGAGACTTAGGAATCTTCCCAATGAGTTATCTTCTGTACAACATCTTAAGGAACTTAGGATTTCTAGTTGCAGACTAGTAATTGACAGAGAGAAGCTACATGTCCTATTTGATGGCTTAAGAACTCTACAAAAACTGCATTTGAAGGATTGTTGTAACTTGTTTGAACTCCCTGACAACATCAACAACTTATCATTCTTATATGAGCTAAGACTAGATGGAAGCAGTGTGAAGATGTTGCCTGAAAGCATCAGGCATCTTAAAAATCTTGAAATTCTATCTTTAAAGGGTTGCATGAAGCTTCAAAGTCTACCTGAGCTTCCACTATTTATTAAAGAGTTTAATGCTGTTAACTGCGGGTCATTGGTGACGGTATCCACTTTAAACACTTTCGGAGAACGCATGATAGGGAAGGACAAATTCATTTCATTTCAGAATTGCAAGAAACTGGATGGATCTTCACTCCGCCGCATTATGGAAGGTGCCCACTTAACAATAATGAAAGCTGTAACTGAGAATATATATGTAAGAAAATATGGACTTAAAATCCATAGCTATAATTATACCTCCATAAAGGTTTGTTTTCCTGGAAGCAAAGTTCCTGAGCATTTCACATCACAAACAAGAGACTCCTCAATTCCTATTAAACTTCCTTTTGATTCCAACTACCATGGCATAGTTTTGTGTGCAGTTCTTTCTCCGTTCGAGGGAATGAAGAAGAATGGTGCTAAAATCTTTTGTCAGTGCTACTTGGCAGATGGTACAAAGCTTGGACACGCATCTGCATGGTATCATAAAGCTATCCCTGACTTGAATTCTGATCATGTGTTTATGTGGTATGATGCATTCCATTTTGACAGCATTTTCAGAAGTTATGAAACCCAGGTTTCTTTTATGTTCTATCTTACAATTACAAATAATAAGGGGGAACGTGAGGTCTTGAACCTTGGTACCAAAGAGTGTGGGGTCTACCTAATTCCACAGTCACAACATGGTTCAACCATAACAGAACTTGAAACATCTTATGGGAATAGATGCAATGAAGTTAGGAATCAAGAACTGGGATCTTGGTTGAGGCACTCTTTCTACTTAGGCCTATGTTTGGGAACATTCCTTTGTGCTGCTGCAGTAGTGGCAAAATCAAGACACCTTAGATGA 3477 0.3713 ESISIAISILKNIMMSIPEKLYDVFISFRGEDTRRNFTSHLHSELIDVNMWTYTDNNLSKGHEVWPALCSAIHNSHIAIVVFSRNYATSKWCLKELVKILECRKSEGLVVIPVFYRVDPSDIRNQRGSYGEAFAKHVRGINDKGMEDFVENENQVSLWKSALTEAANISGWDSCSRDYKNDSQLIKKIVKDVEEKRNIVSPYEVGGEIEDLVGIDKLCEDVKLLLAKEQKTNWLLKNGQVIGIWGMAGIGKTTIAKAVFCEFFPQYDSVCFLSNVREESKRLGLADLHDRLLCELLKDENPKSTFIKRKLHNKKVFIVLDDVDSADQIDELCRECKYAGPDSKLIITTRNKHLLTARVDEDSIYEVKTWSFDKSMELFSMHAFKRKYHQKGYEDLSKRAVEYAGGLPLALKVLGSNLHSRTAEFWDSELRKLITDPNDKIQNVLQVSYDGLNRLEKKIFLDIAFFFKDERKDFALRVLNACGFHATSGMKVLEDKALITISNRRRIQIHDLQQEMGLKIVRQDIEDPGKRSRLRDIEEVSDVLENKKGSDAIEGIKLDLSEIDDFHLNADTFNMMTNLRFLILYVPLGKRSGHVEYPRVFNKFPAKLRYLEWHGYHLNSLPPTFNAKMLVEIRMPCSNILELWWGVKDVPNLVRIDLNECKQLKNLPDLCKATKLQWLNLSGCESLRDVHPSILSLDTLETLIVDNCKKLKCLKGERHLKSLHTISVNGCTNLKEFAVTSDSMTKLDLRNTGIEKLNSSIGRLTRLTWLNLEGLRLRNLPNELSSVQHLKELRISSCRLVIDREKLHVLFDGLRTLQKLHLKDCCNLFELPDNINNLSFLYELRLDGSSVKMLPESIRHLKNLEILSLKGCMKLQSLPELPLFIKEFNAVNCGSLVTVSTLNTFGERMIGKDKFISFQNCKKLDGSSLRRIMEGAHLTIMKAVTENIYVRKYGLKIHSYNYTSIKVCFPGSKVPEHFTSQTRDSSIPIKLPFDSNYHGIVLCAVLSPFEGMKKNGAKIFCQCYLADGTKLGHASAWYHKAIPDLNSDHVFMWYDAFHFDSIFRSYETQVSFMFYLTITNNKGEREVLNLGTKECGVYLIPQSQHGSTITELETSYGNRCNEVRNQELGSWLRHSFYLGLCLGTFLCAAAVVAKSRHLR 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0832 1158 SMART AAA_5 237 368 IPR003593 -
Lal13g0832 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 981 IPR044974 GO:0006952
Lal13g0832 1158 PANTHER NB-ARC DOMAIN PROTEIN 26 981 - -
Lal13g0832 1158 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 171 IPR035897 -
Lal13g0832 1158 Pfam NB-ARC domain 231 438 IPR002182 GO:0043531
Lal13g0832 1158 Gene3D - 202 360 IPR027417 -
Lal13g0832 1158 Gene3D - 370 452 IPR042197 -
Lal13g0832 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 462 IPR027417 -
Lal13g0832 1158 Pfam TIR domain 22 199 IPR000157 GO:0007165
Lal13g0832 1158 ProSiteProfiles TIR domain profile. 20 196 IPR000157 GO:0007165
Lal13g0832 1158 SMART till_3 21 168 IPR000157 GO:0007165
Lal13g0832 1158 Gene3D Ribonuclease Inhibitor 742 936 IPR032675 -
Lal13g0832 1158 Gene3D Ribonuclease Inhibitor 528 741 IPR032675 -
Lal13g0832 1158 Pfam C-JID domain 968 1101 IPR045344 -
Lal13g0832 1158 SUPERFAMILY L domain-like 509 910 - -
Lal13g0832 1158 PRINTS Disease resistance protein signature 240 255 - -
Lal13g0832 1158 PRINTS Disease resistance protein signature 309 323 - -
Lal13g0832 1158 PRINTS Disease resistance protein signature 403 417 - -
Lal13g0832 1158 PRINTS Disease resistance protein signature 858 874 - -
Lal13g0832 1158 Gene3D - 19 200 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0832 Lal-Chr13 5658593 5663194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0832 20 843 WRKY Transcription Factor Family AT4G12020 31.517 2.04e-93 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0832 - - ccaj:109795381 1259.97