Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0829 ATGGCCACCATAGATCAGCTTTTCTTTGTTAAAGAAATTGCTATATCCATCTTCATCTTTTTGATAATCCATCTTTACTTCAACCATCAACGAAGAAAACTTCCACCTGGGCCAAGAGGTTGGCCAGTTTTAGGTGCACTCCCACTCATGGGAACCATGCCTCATGTTGCTCTCTCAAATCTCGCCAAAAAATATGGACCCGTTATGTACCTTAAAATGGGCACAAATTATGACTTGGTTGTGGCCTCTACTCCTGATGCAGCTCGTGCATTTCTTAAAACCCTTGACCTAAACTTCTCTAACCGGCCTACAAACGCTGCTTCAACTCACTTAGCTTATGGCTCAAACGCAAGTTCTCTCACTCAACTTGAGATTTTCTTAATATATACTTTGCCTTATAAAGAACATATCATCACAAAAGACATGGTATTTGCTGAATATGGACCTAGGTGGAAGTTGCTTAGGAAACTAAGCAACTTGCACATGCTAGGTGGAAAAGCTCTTGATGATTGGGCACAAGTTAGAGAGGAAGAGATGAATCACATGCTTGATGCAATGAATGATTGTAGCAACAAGGGTGAAGCTGTGGTGGTATCTGAGATGTTAACATATGCTATGGCTAATATGATAGGCCAAGTTATACTTAGCCGTCGTGTGTTTGAAACCAAGGGTTCTGAGTCTAATGAATTCAAGGACATGGTTGTTGAGCTTATGACAATTGCTGGGTACTTTAACATAGGTGATTTTATACCATTTTTTTCATGGTTGGACCTCCATGGAATAGAGCGTAAGATGAAGACATTACACATAAAGTTTGATAAGTTGTTGACAAGGATGATAGAGGAGCATGGGGCTTCTAGTCATAAGCGTAATCATAAACCTGATTTCTTAGACGCTGTTATGGCTTATCATACTGAAAATTCTGAAGGTCTAACACTCCCAAACATCAAGGCTCTTCTATTGAATTTATTCACCGCAGGAACAGATACATCTTCAAGTATCATAGAGTGGGCACTATCTGAGATGTTGAAAAATCCCATAATCTTTAAGAAAGCTCATGAAGAAATGGACCAAGTCATAGGGAATCAACGACGCCTAAAAGAATCTGACCTACAAATGCTTCCTTATTTACAAGCCATATGCAAAGAAACATACAGATTGCACCCATCAACCCCACTCAACTTGCCTAGAGTTTCATCACAACCATGCCAAGTTAATGGATACTACATCCCCAAGAATACTAGGCTAAGTGTTAATATTTGGGCTATAGGGCGTGACCCAAATGTGTGGGACAACCCTTTGGAGTTTAACCCATCAAGGTTTCTTAGTGGAAAAAATGCTAAAATTGACCCACGTGGAAATGATTTTGAGTTAATTCCATTTGGTTCTGGGAGGAGAATTTGTGCAGGTACAAGGATCGGGGTTGTGATGGTTCAGTATATTTTGGGTACTTTGATTCATTCCTTTGATTGGAAGCTGCCGAATAATTTGTCTGAGTTGAACATGGAAGAAGCTTTTGGGCTTGCCTTGCAGAAAAAGGTTCCTCTCTCTGCTATCATTAGCCCTAGGTTGCACCCTTCTGCTTATTTTCATTGA 1596 0.4016 MATIDQLFFVKEIAISIFIFLIIHLYFNHQRRKLPPGPRGWPVLGALPLMGTMPHVALSNLAKKYGPVMYLKMGTNYDLVVASTPDAARAFLKTLDLNFSNRPTNAASTHLAYGSNASSLTQLEIFLIYTLPYKEHIITKDMVFAEYGPRWKLLRKLSNLHMLGGKALDDWAQVREEEMNHMLDAMNDCSNKGEAVVVSEMLTYAMANMIGQVILSRRVFETKGSESNEFKDMVVELMTIAGYFNIGDFIPFFSWLDLHGIERKMKTLHIKFDKLLTRMIEEHGASSHKRNHKPDFLDAVMAYHTENSEGLTLPNIKALLLNLFTAGTDTSSSIIEWALSEMLKNPIIFKKAHEEMDQVIGNQRRLKESDLQMLPYLQAICKETYRLHPSTPLNLPRVSSQPCQVNGYYIPKNTRLSVNIWAIGRDPNVWDNPLEFNPSRFLSGKNAKIDPRGNDFELIPFGSGRRICAGTRIGVVMVQYILGTLIHSFDWKLPNNLSELNMEEAFGLALQKKVPLSAIISPRLHPSAYFH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0829 531 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 SUPERFAMILY Cytochrome P450 27 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Lal13g0829 531 Pfam Cytochrome P450 137 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 Pfam Cytochrome P450 35 116 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 Gene3D Cytochrome P450 27 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PANTHER CYTOCHROME P450 71B11-RELATED 139 522 - -
Lal13g0829 531 PANTHER CYTOCHROME P450 71B11-RELATED 9 116 - -
Lal13g0829 531 PANTHER FLAVONOID 3'-MONOOXYGENASE 9 116 - -
Lal13g0829 531 PANTHER FLAVONOID 3'-MONOOXYGENASE 139 522 - -
Lal13g0829 531 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0829 531 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0829 Lal-Chr13 5638477 5641243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0829 13 529 Cytochrome P450 AT5G07990 43.019 4.06e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0829 K13083 - gmx:547705 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0829 13 5638477 5641243 Lal13g0829 13 5638477 5641243 ECH