Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0827 ATGGCTCCTACACCTTCTTCCAAACCAAATCATACAACCCAGTTCAAGACTCCACACTCCAAACATCGCCTCAATTTCAATGGTCTCAAAGCACAAACGCCATATCCAAATCCAAATCCAAATCCCAATTCTACCCCTCCTGAACACCCAATTGAAGTAATTGCCAGAATCCGAGACTACCCAGATAAAAAGGACAAACCTTTATCCGTTCTTCAAATCAATTCAACATCAAGTTCAATTCGGGTTCGCGCTGATTTCGGGTACCGGGATTTCACCCTTGATGGGGTGTCTATGTCTGAGGAAGAGGACTTAGATTCATTCTACAAGAAATTTGTGCAATCAAGGATCAATGGGGTTAAGCTAGGGGAGAAATGTACCATCATGATGTATGGGCCAACTGGTTCTGGAAAGAGTCACACCATGTTCGGGTGTTCGAAACAGGCAGGGATTGTGTATAAGTCATTGAAGGACATTCTTGGAGATGGGGATGGAGAAGGAGAACATCTTGGGTTGGGAATGGGAACCTTTGTTCAGGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTCTTATCCACTAATGGTGGTGGAGGTGGATTTGGATTTGGGTGGCCTAAGGGTAGTGCTTCAAAGAACATGAATTTTCTGATTGCATTAGCATTACCTTTATGGAATTTGGACTGGACCACAAAAGTGAAACTTGAAGTGATGGGAAAAAAGGCTAAGAATGCTACCTACATATCTGGAACAGAAGCAGGCAAGATCTCGAAAGAAATTCACAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACACTTTGTAATGACAGGAGTTCCAGAAGTCACTGCATGGTAATCCTTGATGTCCCAACTGTGGGAGGGCGCCTAATGCTTGTTGACATGGCTGGATCGGAAAATATCGAACAAGCTGGTCAAATTGGATTTGAGGCCAAAATGCAGACTGCGAAGATCAACCAAGGCAATATAGCGCTGAAGAGAGTGGTGGAGTCCATTGCAAATGGTGATTCACATGTGCCTTTTAGGGACAGCAAACTTACAATGCTTCTGCAGGATTCCTTTGAAGATGACAAGTCCAAAATTTTAATGATACTTTGTGCAAGTCCTGATCCTAAGGAGATACATAAGACAATGTCTACACTTGAATATGGAGCAAAAGCAAAATGTATAGTTCGTGGTCCTCATACCCCAGTCAAGGATGATGAATCTTCTTCTGCTGTCATTTTGGGTTCAAGAGTTGCTGCCATGGATGAATTTATCATGAAGCTGCAAATGGAGAAAAAGCTCAGAGAGAAAGAGCGAAATGAAGCACACCAAAAGCTTTTGAAGAAAGAGGAAGAAATTGCCGCATTAAGAGCTAAAGTAGAGATCACAGAAGGAAAAGGAACTGCTGCAAGTGAGGAGGAGATTAACTTGAAGGTAAATGAACGAACTCGGCTTCTGAGGCAAGAGTTGGAAAAGAAGTTAGAAGAGTGCCAAAGAATGACAAATGAGTTTGTTGAATTGGAGAGGAGGAGAATGGAAGAAAAGATACTGCAGCAACAGGAGGAGGTTGAAATTCTGAGAAAGCGGCTTGAAGAAATTGAGTTGCAGCTGTCTCGTTCGAGGGAAGTATGTAATGAGGAAAATGAATCAAAAGACATGGAGCCAAGTGGGTTTGCCAGAAGGCTAATGCATATTTACAAGAGTGCAGAAGACCCTGGAATGGTGAAATCAATGGACTTGGACATGGATGATCAAGAACCCCTAGGCCGTGAAGTAAAACTTGTTGGTGGAGTTATGTGCAAGAGTGATTACAATATTATGCAAGACTTTTCATTTGCAAATCAACCTGATCCAAATACTTTGAATGGTGCACCAAGCTTTGGCCAAAGACTATGTCTGAGTACAGTATACGAAGAAGAAGAAGGAGAAGGCGAAAAGGATCATGAAGATAAAGGGGAAGAAGATGAGGAAGTGGAGAAAGAAGTGATAGAGGAGAAAAGGGTATTATGCACTATTGATAATAAGATTAGTCCAAAGAGAGAAGCTTATTGTTTTAAGGAAAGTTCAGATGATGAAAAGGATAGTGATTCTTGTAGACTACTTAGAATTCAAAACATATTTACTCTTTGTGGAAACCAAAGAGAGCTCTCACAAAACATTGCAACCCCAACTTCTGATTTCAAGTTTTCTCCTGTGAAGACATGTGAGAAGGATTCTACTACTACTGTCTTTAAAGTCTCCAACAAGGAGAACATGGAACCATACAATGCTTTGGGAATTTAG 2289 0.4128 MAPTPSSKPNHTTQFKTPHSKHRLNFNGLKAQTPYPNPNPNPNSTPPEHPIEVIARIRDYPDKKDKPLSVLQINSTSSSIRVRADFGYRDFTLDGVSMSEEEDLDSFYKKFVQSRINGVKLGEKCTIMMYGPTGSGKSHTMFGCSKQAGIVYKSLKDILGDGDGEGEHLGLGMGTFVQVTVLEIYNEEIYDLLSTNGGGGGFGFGWPKGSASKNMNFLIALALPLWNLDWTTKVKLEVMGKKAKNATYISGTEAGKISKEIHKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTMSTLEYGAKAKCIVRGPHTPVKDDESSSAVILGSRVAAMDEFIMKLQMEKKLREKERNEAHQKLLKKEEEIAALRAKVEITEGKGTAASEEEINLKVNERTRLLRQELEKKLEECQRMTNEFVELERRRMEEKILQQQEEVEILRKRLEEIELQLSRSREVCNEENESKDMEPSGFARRLMHIYKSAEDPGMVKSMDLDMDDQEPLGREVKLVGGVMCKSDYNIMQDFSFANQPDPNTLNGAPSFGQRLCLSTVYEEEEGEGEKDHEDKGEEDEEVEKEVIEEKRVLCTIDNKISPKREAYCFKESSDDEKDSDSCRLLRIQNIFTLCGNQRELSQNIATPTSDFKFSPVKTCEKDSTTTVFKVSNKENMEPYNALGI 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0827 762 Gene3D Kinesin motor domain 31 400 IPR036961 -
Lal13g0827 762 ProSiteProfiles Kinesin motor domain profile. 50 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0827 762 SMART kinesin_4 48 405 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0827 762 Coils Coil 482 552 - -
Lal13g0827 762 Coils Coil 441 468 - -
Lal13g0827 762 Pfam Kinesin motor domain 79 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0827 762 PRINTS Kinesin heavy chain signature 122 143 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0827 762 PRINTS Kinesin heavy chain signature 273 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0827 762 PRINTS Kinesin heavy chain signature 296 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0827 762 PRINTS Kinesin heavy chain signature 346 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0827 762 PANTHER KINESIN-RELATED 26 732 IPR027640 GO:0003777|GO:0007018
Lal13g0827 762 MobiDBLite consensus disorder prediction 644 662 - -
Lal13g0827 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 404 IPR027417 -
Lal13g0827 762 MobiDBLite consensus disorder prediction 640 662 - -
Lal13g0827 762 PANTHER KINESIN-LIKE PROTEIN KIN-10A 26 732 - -
Lal13g0827 762 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0827 Lal-Chr13 5609045 5612487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0827 99 409 Calmodulin-binding Proteins AT5G65930 25.538 4.17e-24 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0827 13 5609045 5612487 Lal13g0827 13 5609045 5612487 ECH
Lal13g0827 13 5609045 5612487 Lal24g0643 24 4737069 4740592 LSH