Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0824 ATGGTATTCAAGTATATTCATCTCAAACTCAAGGTATTCAGGTTGAAACGTTTTCTTCTAAGAAAAAATGGAGGCAGAAAGAGAAAGCATTTATCTGCAAAGAAGCCTTCATGGATGATGCCAATAACACATGGCTATTATGTTGTGGAACAACATATGATTAGAGATGATTGTTCTGATGACTCAGACTTTGATTCTGTTGTGATACAAAGAGAGCAAATAAATGACACAGAATTGTGGTATTTTGGAATCTTTGATGCACTATTTGGAGACATGGTTACCAAGTACATGCAATCCCATTTCTTTGACAAGAAGCTTAAAGAGTCTCATATAAGGAGAAAAGGCAAGAAAACACTGAAGAGAGCTTACCTTGGTGCAAGGGCAAAGATAAGAGATGAACACAATTCAGAGGAGACATGTAGAATGGGATCAACATCTGTTATTGTGATAAATGGAGAAAAACTTGTAATAGCAAACATAGGAGATTACAGAACTGTTGTTTGCAGAGATGGTATAGCTTATCAGGCAACAGGGAGATACCAAGAATCAGCCAAAAGACATTGGTCTCAAAGAATATTTTCAGGATGTGAACCAGAAAATGTAGCAGATACAAGGAATTCTAGAGGCTCAGAACTTGTGGTTAGAGATGAAAGGGTTGATTCTGATACTGAATTTGTGATATTAGCAAGCAATGGTATATGGGAGGTGATGAAGAACCAAGAGGCTGTTAATTTGATTAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGTTTGGCAAAGGAAGCTTTGATTAGGATGAGCAGAAGCAGTATCTCATGCTTAATCATTCGCTTTGACTAA 843 0.3725 MVFKYIHLKLKVFRLKRFLLRKNGGRKRKHLSAKKPSWMMPITHGYYVVEQHMIRDDCSDDSDFDSVVIQREQINDTELWYFGIFDALFGDMVTKYMQSHFFDKKLKESHIRRKGKKTLKRAYLGARAKIRDEHNSEETCRMGSTSVIVINGEKLVIANIGDYRTVVCRDGIAYQATGRYQESAKRHWSQRIFSGCEPENVADTRNSRGSELVVRDERVDSDTEFVILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMSRSSISCLIIRFD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0824 280 ProSiteProfiles PPM-type phosphatase domain profile. 61 279 IPR001932 -
Lal13g0824 280 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 279 - -
Lal13g0824 280 SUPERFAMILY PP2C-like 67 280 IPR036457 -
Lal13g0824 280 CDD PP2Cc 81 279 IPR001932 -
Lal13g0824 280 Pfam Protein phosphatase 2C 80 175 IPR001932 -
Lal13g0824 280 Pfam Protein phosphatase 2C 219 270 IPR001932 -
Lal13g0824 280 SMART PP2C_4 51 277 IPR001932 -
Lal13g0824 280 Gene3D - 56 280 IPR036457 -
Lal13g0824 280 PANTHER ALPHABET, ISOFORM E-RELATED 6 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0824 Lal-Chr13 5592584 5594955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0824 1 279 PP2C-type Phosphatase Gene Family AT3G23360 49.286 4.23e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0824 K19704 - gmx:100785227 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0824 13 5592584 5594955 Lal13g0824 13 5592584 5594955 ECH