Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0822 ATGGCCAACAACAACATTAACAACTTCAACAATTTTTCTGTTTGCCATGATCAACTTGGAAACCCTCGCTACACATGCAGAGTATGCAACACTGTTTTCAACGACCCAGTAACATTCATCAGACATATCGAGTCTCATGTGACCCATGAAAGTGTTGCAATGAGAATGCTTAGACGTAATTTCAATAGGTCTATGCTGAATCAGGAAACAAGAAACCTTGATGCTAGAAGGGTTCCTCAATCATTGCCACAACAACATACATTCATGCCTCAAACAAGACCAAGACAATTTCATTATACCCCAAACCCTATTCAGCCAAGGCAATTTCAACCAGTTTTACCTTCTTCTAGGAACATTGTACGTGAAGTGCCACCATTGTTTACTCCACAAATCCAACAACAGATGGGAATGGAAGTGTCTCCAATTGATGGAACCAAGCCTTATATTAACCTTTTAGACAAACCCATCAACAAAAATGAGTTTGCTAATATGTTAAACATGTCTGGTGAAAACCTAGATTTGACATTAAGGCTCTAG 537 0.3892 MANNNINNFNNFSVCHDQLGNPRYTCRVCNTVFNDPVTFIRHIESHVTHESVAMRMLRRNFNRSMLNQETRNLDARRVPQSLPQQHTFMPQTRPRQFHYTPNPIQPRQFQPVLPSSRNIVREVPPLFTPQIQQQMGMEVSPIDGTKPYINLLDKPINKNEFANMLNMSGENLDLTLRL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0822 178 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Lal13g0822 178 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
Lal13g0822 178 SMART c2h2final6 24 46 IPR013087 -
Lal13g0822 178 Pfam Zinc-finger of C2H2 type 24 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0822 Lal-Chr13 5575451 5575987 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal13g0822 zf-met 1.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0822 - - pvu:PHAVU_007G056300g 95.1301