Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0819 ATGACTGAACCCTCTTCAACCTTAAATGTTGAGGGACAGGTTCCACCACCTACCTCTCTCCTAAAGATGATCGTTGTGGCCTCTATCGCCGCCGGTATTCAATTTGGGTGGGCCCTACAACTCTCACTTTTGACCCCATATGTCCAGCTATTGGGTGTCCCACACGCTTGGTCTTCTGTTATATGGCTTTGTGGCCCAATTTCTGGTCTCGTTGTTCAACCCACCGTTGGTTATTATAGTGATCGGTGCACGTCCCGTTTCGGTCGCCGTCGTCCCTTCATCTTAGGGGGTGCTATAGCCGTAGCCATATCCATTATCCTCATTGGATTCGCGGCGGATTTCGGCTATAGCATGGGCGATGACCTCAACAAGAAGACCAGACCACGTGCCGTGGGCTTCTTTGTTGTTGGGTTTTGGATCCTTGACATGGCCAATAACATGCTCCAGGGACCTTGTCGGGCATTCCTCGGAGATCTCTCCGGGGGAGACCAGCTTAAGATCCGCACTGGAAATTCTGCTTTCTCTTTCTTCATGGCTATCGGGAGTATCCTTGGATATGCTGCTGGGTCTTACGGTAAACTTTACAAGGCGTTCCCTTTCACAAAAACCAAGGCTTGCAATGTTTATTGTGCAAATCTTAAGAGTTGCTTTTTCATTGCTATTGCACTCTTGCTCATTCTTGTCATTATTGCATGTGTTTACGTCAAGGAAATACCCTTGACGTCAACAGACACTATTGATGATGAGGACGAAGTGAAAACTCCATGTTGGGGACTATTTTTTGGCGCATTCAAGGAAATGAAGCGTCCAATGTGGATGTTATTAATAGTGACATTCCTGAATTGGTTCGCATGGTTTCCATGGGTGCTTTACGACACAGATTGGATGGGTCGTGAGGTGTATGGTGGTAGTGTTGGAGATAGTATGTTTGATAAGGGTGTTCATGATGGTTCATTAGGTCTTATGTTAAACTCAATTGTTCTAGCAGTGATGTCAGTGGCCATTGAACCATTGTCTCGTGTTCTTGGAGGAGTGAAGAGACTATGGGGATTGGTGAACTTTATTCTAGCCATTTGTTTAGCAATGACTGTGCTCATTTCTAAGGAGGCTAGGGCTCACCGCCATTTCTTGATTAGTACCGGTGCAAAAGATAATGGTCCGCCACCTAATGTTAGGGGTGGCGCTTTGGCTTTGTTCTCTATTCTTGGCATTCCTCTTGCGATCACTTACAGTGTACCATTTGCTCTAGCATCAATATACTCCAGCACCTCAGGGGCAGGCCAAGGTTTATCTCTGGGAACTCTTAATCTTGCCATTGTCATTCCACAGATGTTGGTGTCAGCAATATGTGGAAAAATAGATGAGGCATTTGATGCAGGGAATTTGCCGGCGTTTGTGATGGGTGCAATATCCGCCGCCATCAGCGCCGTATTGGCATTTGTATTGCTTCCAACTCCTCACCCACAAGATATGGCCAAGGCTGCAACAGTTGCTGGAGGTTTTCATTGA 1509 0.4652 MTEPSSTLNVEGQVPPPTSLLKMIVVASIAAGIQFGWALQLSLLTPYVQLLGVPHAWSSVIWLCGPISGLVVQPTVGYYSDRCTSRFGRRRPFILGGAIAVAISIILIGFAADFGYSMGDDLNKKTRPRAVGFFVVGFWILDMANNMLQGPCRAFLGDLSGGDQLKIRTGNSAFSFFMAIGSILGYAAGSYGKLYKAFPFTKTKACNVYCANLKSCFFIAIALLLILVIIACVYVKEIPLTSTDTIDDEDEVKTPCWGLFFGAFKEMKRPMWMLLIVTFLNWFAWFPWVLYDTDWMGREVYGGSVGDSMFDKGVHDGSLGLMLNSIVLAVMSVAIEPLSRVLGGVKRLWGLVNFILAICLAMTVLISKEARAHRHFLISTGAKDNGPPPNVRGGALALFSILGIPLAITYSVPFALASIYSSTSGAGQGLSLGTLNLAIVIPQMLVSAICGKIDEAFDAGNLPAFVMGAISAAISAVLAFVLLPTPHPQDMAKAATVAGGFH 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0819 502 Pfam MFS/sugar transport protein 32 285 - -
Lal13g0819 502 SUPERFAMILY MFS general substrate transporter 24 489 IPR036259 -
Lal13g0819 502 PANTHER SUGAR TRANSPORTER 13 490 - -
Lal13g0819 502 CDD MFS_SLC45_SUC 23 480 - -
Lal13g0819 502 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 13 490 - -
Lal13g0819 502 Gene3D MFS general substrate transporter like domains 21 484 IPR036259 -
Lal13g0819 502 TIGRFAM GPH_sucrose: sucrose/H+ symporter 19 487 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0819 Lal-Chr13 5546197 5549069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0819 5 502 Sucrose Transporter Gene Family AT1G22710 61.858 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0819 K15378 - gmx:547679 658.292