Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0816 ATGAACACAAACTTGTCTCTCTCTAGCACTAGTCACCTTTCTTCTTCATCCTCATCAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTCACTTCTACAACACTTCAGATTCACTCATTTCGATTCAAGAGTATACATCACAAGAGGCTGTTGAGGTTATTAAAATGGACCCAGTGAGGTGCTGTTTTGCTACATTCAGTTTCAAAAAGAAGGAAACTAGATACATTGCAAATGAAGGGTCAAAGCCCTCAAGAAATGAAAAAGAGCCTTCAAATGTGACGAAACAGAAGGTTGAAGTTGCAAAGCAGTACATAGAAAACCATTATAAGAAGCAGATGAAGGACCTTCAGGAGAGGAAGGAACGACGTAATATGCTAGAGAAAAAGTTGGCTGATGCTGAAGTCTCCGAGGAAGAGAAGCACAACCTGGTTAAGTATTTTGAGAAAAAGGAAAGGGATTACATGCGTCGTCAGAGGCATAAGATGGGGGCTGATGATTTTGAGCCCTTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTCAGAATCTGCCGAGAGAAGGCAAGTGGTAATGTATATGCTATGAAGACGCTTAAGAAATCTGAGATGCTTAGCAGAGGCCAGGTTGAACACGTAAAAGCTGAGAGGAACCTACTTGCAGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGAAAAGTATTTATATCTCATAATGGAGTATCTACCTGGTGGTGATATGATGACGTTGCTCATGCGGAAGGATGTACTGACAGAAGATGAGGCTAGGTTCTATGTTGGGGAGACTGTCCTAGCCATAGAGGATATCAAGCCTGACAACTTGCTGCTAGATAAAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCTCTAGATTGCAGTAATCTTCAGGAAGAGGACTTCTTTGTTGGAGGCAATAGAAGTGGAGCGCTCCAGAGCGGTGGAGGTCCTGTAGCTCCTGAAAGAACTCAGCAGGAGAAACTGCAGCATTGGCAGAAAAATAGGCGAATGCTTGCGTATTCCGCGGTTGGAACGCCTGACTATATTGCCCCTGAAGTTCTACTGAAGAAAGGATATGGCAAGGAATGTGATTGGTGGTCTCTTGGAGCTGTAATGTATGAAATGCTAGTGGGATATCCACCCTTTTATTCAGATAAACCATTGTCGACTTGCAGAAAGATCATAAATTGGAGAACTTATTTAAAATTTCCAGAAGAAGCTAAACTATCTGCAGAAGCAAAGGATCTTATTAGTCGACTCCTATGTAATGTTGACCAGAGGCTTGGAAACAAAAGGGCTGATGAAATAAAGGCTCACCCGTGGTTCAAAGGTATTGAATGGGACAAATTGTACCAAATGAAAGCTGCTTTTGTTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGGAGTTTACAGAGATGGACAGCCAAACTCAAAGTCCCTCAAAATCAGGCCCATGGAGAAAGATGCTGTCATCTAAAGATGTCAACTTTGCTGGGTACACATATAAGAACTATGAAATTGTAAATGATGATCAACTAAGTGGAATTGTTGAGTTGAAGAAGAAGAGCACACAGACTAAACGACCATCTATTAAGACAATATTTGGTTAA 1665 0.4084 MNTNLSLSSTSHLSSSSSSILSLSLSLSLSFHFYNTSDSLISIQEYTSQEAVEVIKMDPVRCCFATFSFKKKETRYIANEGSKPSRNEKEPSNVTKQKVEVAKQYIENHYKKQMKDLQERKERRNMLEKKLADAEVSEEEKHNLVKYFEKKERDYMRRQRHKMGADDFEPLTMIGKGAFGEVRICREKASGNVYAMKTLKKSEMLSRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEKYLYLIMEYLPGGDMMTLLMRKDVLTEDEARFYVGETVLAIEDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLQEEDFFVGGNRSGALQSGGGPVAPERTQQEKLQHWQKNRRMLAYSAVGTPDYIAPEVLLKKGYGKECDWWSLGAVMYEMLVGYPPFYSDKPLSTCRKIINWRTYLKFPEEAKLSAEAKDLISRLLCNVDQRLGNKRADEIKAHPWFKGIEWDKLYQMKAAFVPEVNDELDTQNFEEFTEMDSQTQSPSKSGPWRKMLSSKDVNFAGYTYKNYEIVNDDQLSGIVELKKKSTQTKRPSIKTIFG 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0816 554 Gene3D Phosphorylase Kinase; domain 1 166 251 - -
Lal13g0816 554 Gene3D Phosphorylase Kinase; domain 1 476 486 - -
Lal13g0816 554 Pfam Protein kinase C terminal domain 476 520 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lal13g0816 554 Pfam Protein kinase domain 170 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0816 554 CDD STKc_NDR_like 166 521 - -
Lal13g0816 554 SMART pkinase_C_6 458 522 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal13g0816 554 Gene3D Transferase(Phosphotransferase) domain 1 252 319 - -
Lal13g0816 554 Gene3D Transferase(Phosphotransferase) domain 1 356 475 - -
Lal13g0816 554 SMART serkin_6 168 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0816 554 ProSiteProfiles AGC-kinase C-terminal domain profile. 458 530 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal13g0816 554 Coils Coil 110 137 - -
Lal13g0816 554 SUPERFAMILY Protein kinase-like (PK-like) 149 510 IPR011009 -
Lal13g0816 554 PANTHER SERINE/THREONINE-PROTEIN KINASE 90 553 - -
Lal13g0816 554 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 90 553 - -
Lal13g0816 554 ProSiteProfiles Protein kinase domain profile. 168 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0816 554 ProSitePatterns Protein kinases ATP-binding region signature. 174 197 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0816 Lal-Chr13 5484442 5490298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0816 80 553 AGC Kinase Gene Family AT4G14350 79.132 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lal13g0816 Pkinase 6e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0816 13 5484442 5490298 Lal13g0816 13 5484442 5490298 ECH
Lal12g0712 12 5392712 5400302 Lal13g0816 13 5484442 5490298 LSH
Lal13g0816 13 5484442 5490298 Lal24g0635 24 4664421 4672550 LSH