Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal13g0810 | ATGACAAATGAAATGGTGAAGGCACAGAGAAATAAGGCAAAGGTGTCAACACCATTGACATGTTTTTTATGTAATCAATTGTTCACAAATGCCACTACTGTGGTTGAATGCTTGCATACTTTTTGCAGGGAATGCATAGAGAAGAAGATAACGGATGAGAAAGTAACACACTGTCCAGTATGCAATACAGACTGGGGTTATCTTCCACAGGATAAATTAAAAGCAGACCACAGACTGCAAGGTTTGAGGGACAGAATTTTCCCCTCTAAAGGAAAAAATGGCAAGGTTCCTGAAAATGTGCATCCGGTTACATTGCCAACAAAGTCAAAGGAGGATTCTCTATCTTCACTGAAGGCCAGTGCAAGAAAAGCAAAAACTGCTGCAAAACAAGTTGTCATTCCAAGAGACTCAGATATCTCTTATGCGAAACATGATAAAGTGGTTCAGAACGATGGAAGACACCGTGGGATAGAAATTTTCGATGAAGTTTCTACAATTCTATCTGCAAGAAGAGCAAAAGTTGCTGCAAGAAAGAAATTTATTCAGAGAGAATCCACTCCTCCTAGTCAACCTGACAAAGTAACAGGAGATGAAAAGGAAGATTATGGTCATTCCCGGTCAAATGGAACTTCCAAAACCAGAGTTCAGAACTCTTCACAACCAGAATCTAGGAAGCAAATTGTGGCTAAGAAAACTTGTGAGGGTACTTCTGAGTTATGTAAAGAAAAGGTTGATATGTCTGCGCCATTAACTTCCCTGGTAGAAGCTGTAAGAAGAAATAAGTCAAGTAATAAGTCTCCAATGAAAGAAGTTGCTGCGATTTCTGTGCCTATAGACTCTAGTGACAATAATTCTCAGGGGCCTAAGGTTCAAGTTAAGAAACATTGTCAGGCTGGTGAAAAGAAAGAGTCAAGTTATGCCAAACTTAAAAGGTTGCAGGGCACTCAAGAAAGAACAGTCAAATTATCGGGGGATGTGAATTTTCGAGTACCAGCACCAGGGATTGGTTCAAGCAGTCAAAGCAACAACAACTTTGGGATTCTTCTATCTCAACCTGTGAATGGTTCAAGCGGTAAAAGCGACAAAATATTTGGCAGTCCAGTCTGGTTCTCCTTGGTTGCTTCCGAAAACAACGAAGTAGGTGCAAGATTGGCTCAAATATCTACCCGCTTCATAAGAGTCAAGGATGGTAGTTTACCTGTCTCTTACATCGAAAAGTATATCGTGAAAAAGCTCGGCCTTCCTAGTGATGCTGAGGTGGAGATCTTACTATGGGGTCAGCCAGTTTTATCTTCATGGAAACTACAAAACTTAGTAGAGTTGTGGTTGCAAACAATGCCAAAGGATGAGAAGATTCATACATTTGTTGGAAGCTCAGCTAAGGATTTTGTTATGGTCCTTTCATATGGACTAAAAGCTTGA | 1422 | 0.403 | MTNEMVKAQRNKAKVSTPLTCFLCNQLFTNATTVVECLHTFCRECIEKKITDEKVTHCPVCNTDWGYLPQDKLKADHRLQGLRDRIFPSKGKNGKVPENVHPVTLPTKSKEDSLSSLKASARKAKTAAKQVVIPRDSDISYAKHDKVVQNDGRHRGIEIFDEVSTILSARRAKVAARKKFIQRESTPPSQPDKVTGDEKEDYGHSRSNGTSKTRVQNSSQPESRKQIVAKKTCEGTSELCKEKVDMSAPLTSLVEAVRRNKSSNKSPMKEVAAISVPIDSSDNNSQGPKVQVKKHCQAGEKKESSYAKLKRLQGTQERTVKLSGDVNFRVPAPGIGSSSQSNNNFGILLSQPVNGSSGKSDKIFGSPVWFSLVASENNEVGARLAQISTRFIRVKDGSLPVSYIEKYIVKKLGLPSDAEVEILLWGQPVLSSWKLQNLVELWLQTMPKDEKIHTFVGSSAKDFVMVLSYGLKA | 473 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal13g0810 | 473 | MobiDBLite | consensus disorder prediction | 208 | 226 | - | - | |
Lal13g0810 | 473 | MobiDBLite | consensus disorder prediction | 88 | 120 | - | - | |
Lal13g0810 | 473 | ProSitePatterns | Zinc finger RING-type signature. | 37 | 46 | IPR017907 | - | |
Lal13g0810 | 473 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 6 | 127 | IPR013083 | - | |
Lal13g0810 | 473 | ProSiteProfiles | Zinc finger RING-type profile. | 21 | 62 | IPR001841 | - | |
Lal13g0810 | 473 | SUPERFAMILY | RING/U-box | 17 | 80 | - | - | |
Lal13g0810 | 473 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 5 | 470 | IPR044807 | GO:0004842 | |
Lal13g0810 | 473 | Pfam | Zinc finger, C3HC4 type (RING finger) | 21 | 61 | - | - | |
Lal13g0810 | 473 | SMART | ring_2 | 21 | 61 | IPR001841 | - | |
Lal13g0810 | 473 | MobiDBLite | consensus disorder prediction | 193 | 207 | - | - | |
Lal13g0810 | 473 | MobiDBLite | consensus disorder prediction | 177 | 230 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal13g0810 | Lal-Chr13 | 5451112 | 5455619 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal13g0810 | 1 | 395 | C3H Transcription Factor Family | AT2G30580 | 30.024 | 6.57e-35 | 131 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal13g0810 | K16277 | - | jre:108989436 | 278.87 |