Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0804 ATGGAATCAGGGTTGCCACCGCATCCATCAACGGCGCCGCCGTCAATTTCAACGCGCTCCGCCACTACCATCCTTGGAAAGTACCAATTGACGCGTCTTCTTGGCCGTGGAAGCTTCGCCAAGGTGTACCAGGCTCAATCCCTAATCGACGGCACTACTGTCGCCGTTAAAGTCATCGATAAATCAAAAACCGTTGACGCCGCCATGGAACCACGCATCGTTCGCGAGATCGATGCCATGCGCCGCCTCCATCATCACCCTAACATCCTCAAAATCCATGAAGTCATGGCCTCAAAAACGAAGATCCATCTCGTCGTCGAGTACGCCGCCGGCGGAGAACTCTTCTCCAAGATCAAGCGCCGCGGAAAGCTCCCTGAGAATTTGGCACGGCGTCTGTTCCAGCAGCTCGTCTCCGCGCTCCGTTTCTCCCACCGCAACGGCGTCGCCCACCGCGATCTCAAACCGCAGAATCTCCTCCTCGACAGCGAAGGTAACCTCAAGGTCTCAGACTTCGGCCTCTCCGCGTTGCCGGAACATCTCAAAAACGGTCTCCTCCACACCGCTTGCGGAACTCCGGCATACACCGCCCCCGAAATTCTCCGACGAGGCGGTGGTTACGACGGCTCAAAAGCCGATGCGTGGTCATGTGGCCTCATCCTTTTCGTTCTCCTAGCTGGTCACCTCCCCTTCGACGATTCAAACATTCCGGCGATGTGCAAGATGATTTCCCGGCGAGATTTTCGGATTCCAGATTGGATTTCAAAACCAGCTCGATTCGTAATAAACCGGTTACTTGATCCAAATCCAGGAACCCGAATGAGCCTAGAATCTCTATACAATAATAACTCATGGTTTAAAAAATCACTTCGAACTGAACCCGAAGAGAGCGTATTCGGGTCGGGTCTGTATAAGAACAGTTATGATAACTCACACGAGGGTTGTTGTTACAAGGGTTCAGGTGTAAACGCGTTTGATATAATATCCATGTCTTCAGGTTTAGATTTGAGGGGTTTGTTTGAAACGACATCGTATAGGAACAATGAGAAGAGGTTTAGTTCAAATAAAAGGTTGGAGGTGGTGGAGGAGAAGGTTAAAGAGGTTGGAAGTGTTTTGGGGTTTAGAGTTGAGATACGGAAGAATGGTGCAATTGGGTTTGGGAAAGGGAAAGTGGGTTTGGTTGTTGAAATGTTTGAAATTGTTGAAAATGAATTGTTGTTGGTGACTATGAAGGTTGTTGATGGTGGATTGGAATTTGAGGAGCTTCATTGGGAGGATTGGAAACTTGGGTTGCAAGATGTTGTTCTTTCTTGGCAAGATAATAATGAATCAATAACATTATGA 1341 0.4884 MESGLPPHPSTAPPSISTRSATTILGKYQLTRLLGRGSFAKVYQAQSLIDGTTVAVKVIDKSKTVDAAMEPRIVREIDAMRRLHHHPNILKIHEVMASKTKIHLVVEYAAGGELFSKIKRRGKLPENLARRLFQQLVSALRFSHRNGVAHRDLKPQNLLLDSEGNLKVSDFGLSALPEHLKNGLLHTACGTPAYTAPEILRRGGGYDGSKADAWSCGLILFVLLAGHLPFDDSNIPAMCKMISRRDFRIPDWISKPARFVINRLLDPNPGTRMSLESLYNNNSWFKKSLRTEPEESVFGSGLYKNSYDNSHEGCCYKGSGVNAFDIISMSSGLDLRGLFETTSYRNNEKRFSSNKRLEVVEEKVKEVGSVLGFRVEIRKNGAIGFGKGKVGLVVEMFEIVENELLLVTMKVVDGGLEFEELHWEDWKLGLQDVVLSWQDNNESITL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0804 446 Gene3D Transferase(Phosphotransferase) domain 1 18 317 - -
Lal13g0804 446 Pfam NAF domain 321 376 IPR004041 GO:0007165
Lal13g0804 446 PANTHER SERINE/THREONINE KINASE 19 439 - -
Lal13g0804 446 Pfam Protein kinase domain 28 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0804 446 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 439 - -
Lal13g0804 446 SUPERFAMILY Protein kinase-like (PK-like) 24 281 IPR011009 -
Lal13g0804 446 Gene3D Kinase associated domain 1, KA1 318 435 - -
Lal13g0804 446 ProSiteProfiles Protein kinase domain profile. 28 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0804 446 SMART serkin_6 28 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0804 446 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Lal13g0804 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lal13g0804 446 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Lal13g0804 446 CDD CIPK_C 322 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0804 Lal-Chr13 5372000 5373340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0804 1 440 Miscellaneous Gene Families AT3G23000 55.605 2.33e-163 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal13g0804 Pkinase 1.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0804 K12761 - gmx:100305372 624.394