Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0788 ATGACTTGTGGACTGGCTTGTGGCTTGGCACGAGTCATGAGCACGAGCTTGGCCAAGGATGCACAGTCAGATTTAGGGTCACAGCGTATCTGGTGCTCAACACGAATTAGATTGGCATGGTCTTGGCGCATCAGGTTGTCTCGGTCAGGCAAGGTATTGGCGCATCAGGTTGTCTCAGTCATACAAAGTATTGGCACATCAGGTCCTTCTTATATGTGCATCAATATAATGTTTGGCAAAGAGGTTGAATCACAGATAACTTTAAACCTTCCCATCAACAGAATAAGTTCACAAATTGCAATATACACTACCTTAGTAAATCCCATATCCAAATATGCTTTGATGGTAACACCAATTACTAATGCTTTAAAAGCGTTGCTTCCACAACAATACAAGAAGGACAAGCTCACAAGTATCTTAATCAACACTATCTTGGTAATCAGCACTGTAATTATTGCTATAACAGTTCCATTCTTTGCATATCTCACATCACTGGTTGGAGCATTCCTAAGTATCACTGCTTCAATTATACTTATGTGCTCCTGCTACTTGAAGATTTCTGGCACTTATAACAAACTTGGGATTGAAACAGTGGCCATAATGACAATAATATTCTTAGGTGTGGTCGTAGGAATATTTGGTACTTACACTTCACTGCTTGAAATTATCAATCATCTTTAG 681 0.3965 MTCGLACGLARVMSTSLAKDAQSDLGSQRIWCSTRIRLAWSWRIRLSRSGKVLAHQVVSVIQSIGTSGPSYMCINIMFGKEVESQITLNLPINRISSQIAIYTTLVNPISKYALMVTPITNALKALLPQQYKKDKLTSILINTILVISTVIIAITVPFFAYLTSLVGAFLSITASIILMCSCYLKISGTYNKLGIETVAIMTIIFLGVVVGIFGTYTSLLEIINHL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0788 226 PANTHER VACUOLAR AMINO ACID TRANSPORTER 1-LIKE ISOFORM X1 75 224 - -
Lal13g0788 226 Pfam Transmembrane amino acid transporter protein 77 218 IPR013057 -
Lal13g0788 226 PANTHER OS05G0424000 PROTEIN-RELATED 75 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0788 Lal-Chr13 5229142 5230122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0788 76 224 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.020 6.14e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0788 K15015 - gmx:100794374 209.149