Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0787 ATGGCTTCATCCATGAATGTGCCATTTTTACAAGAGGAAGCACACCATATAGATGAGGAGAAAGAGGGTTTTGGTGAAGATTCATCATCTACTACCACAAACACTGTCACCTTCTTACGCACCTGTCTTAATGGAATCAACGCATTATCAGGAGTTGGAATTCTGTCAGTTCCATATGCTCTTGCATCAGGTGGATGGCTAAGCTTAATTCTTCTACTTTTTATTTCCATGGTAACCTTTTACTCAGGGATATTGATCAAAAGATGTATGGATATGAATTGTAAAATTAGAACCTTTACTAATATGGGTGAGGTTGCATTTGGAAAGATAGGAAGAGTACTTGTACAAGCAACTATGTTCACTGAGCTTTACTTAGTTGCAGCAGAGTTCTTGATTCTAGAGGGTGATAACTTGCAAAATTTATTCCCAAATATTGATATTAAAATAGCTGGCTTAGAAGTTGGTGGAAAACAGTTTTTTGTGATACTGGCCTGTCTTGTGATTATGCCTACTGTATGGTTGGATGACTTGAGCCTCCTTTCTTATATATCTGCTGGTGGGGTACTTGCTTCTGCTATCTTCATCATCGCAGTATTCTTCACTGCAATACTTGATGAATCTATTGGATATAATGGAAATGGGACTCTTCTTAATTGGAATGGGGTTCCTACAGCTGCTAGCTTGTATGCCTTTTGCTACTGTGCACATCCAGTGTTTCCCAACCTCTATAATTCCATGAGAAACAAACACCAGTTTTCCTATGTTCTTCTTGTATGCTTTGTAGTGAGCACTGCAGGGTATGCATTTGTTGCTATAACAGGTTATCTAATGTATGGCACAAAGGTTGATTCACAGATAACTTTAAATCTGCCCAAAGACAAAGTAATGTCACATGTAGCAATATATACTACCCTGGTGAATCCCATAGCCAAATATGCTTTGATGGTAACACCAATTACCAATGCTTTAAAAGGTTTGCTTCCAAAACAAAAGAAGCATAAGCTCAGCAGTGTCTTAATCAGCACTACTTTGGTAATCAGCACTGTAATTGTTGCCCTGACAGTTCCATTTTTCGCATATCTCACATCACTGGTTGGAGCATTCCTAAGTATCACAGCTTCAATTATACTTCCATGCTCCTGCTACTTGAAGATTTCTGGCACTTATAACAAACTTGGGATTGAAACCGTGGCCATAGCTATAATAATATTACTAGGTGTGGTTATAGGAATTTTTGGTACTTGGACATCAATTGTACAAATAATAGAGCATTTGTAA 1278 0.3795 MASSMNVPFLQEEAHHIDEEKEGFGEDSSSTTTNTVTFLRTCLNGINALSGVGILSVPYALASGGWLSLILLLFISMVTFYSGILIKRCMDMNCKIRTFTNMGEVAFGKIGRVLVQATMFTELYLVAAEFLILEGDNLQNLFPNIDIKIAGLEVGGKQFFVILACLVIMPTVWLDDLSLLSYISAGGVLASAIFIIAVFFTAILDESIGYNGNGTLLNWNGVPTAASLYAFCYCAHPVFPNLYNSMRNKHQFSYVLLVCFVVSTAGYAFVAITGYLMYGTKVDSQITLNLPKDKVMSHVAIYTTLVNPIAKYALMVTPITNALKGLLPKQKKHKLSSVLISTTLVISTVIVALTVPFFAYLTSLVGAFLSITASIILPCSCYLKISGTYNKLGIETVAIAIIILLGVVIGIFGTWTSIVQIIEHL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0787 425 Pfam Transmembrane amino acid transporter protein 35 418 IPR013057 -
Lal13g0787 425 PANTHER OS05G0424000 PROTEIN-RELATED 32 422 - -
Lal13g0787 425 PANTHER AMINO ACID TRANSPORTER AVT1J 32 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0787 Lal-Chr13 5224897 5227039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0787 17 422 Amino Acid or Auxin Permease AAAP Family AT3G28960 51.351 5.85e-145 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0787 K15015 - gmx:100794374 539.265