Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0778 ATGAACTTGAATCATGAAATACCAGAGGCTGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAAGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTTAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTACGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAACGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTGGTTCATTTGCCGGTCAATCTGGTGGATATCGAATAATAGGAAATGGTGACGCAGAATCAGCATTACAATACCTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACTGTATTTGCTGCTGGTATTGTGTCCAACGAGACAGAGGAAACGTATGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGAATTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGGCATCTCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTTTGCTGGTTTGCATACGACATCACGTTGTGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTCATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCTGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAAATGGCATGTATCACATTATGATAATGGTAGTAATGTGGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTGTTTTTTTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAAAAGCAGTAGATACGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAAAGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGATCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAGATCAAGTAAGAGACCCAGTTCGAGTGCGTGCTAAAGGGAGAGTACCGGGGATTACCTCAAGGTCCAAGCGAGGTAATCAATGTGGTTTATGTCGAGAAATTGGGCACAATAGGGCAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCAATGAAGAATGA 1992 0.3715 MNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTTREVGIGTGKIFGSFAGQSGGYRIIGNGDAESALQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVEIDEFNMMWEELIAKHALHNNAWASQIFDCRSMWARSYIRGKFFAGLHTTSRCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVVFKEFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKKWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSVFLLLILDISQLPSCLVLERWTKKAKNVEGVNFQQCELSRESVKSSRYGALSDACRVLCNLACEKEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNANVDQVRDPVRVRAKGRVPGITSRSKRGNQCGLCREIGHNRASCPNIVGSCSRTFDNDFNEE 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0778 663 Pfam FAR1 DNA-binding domain 42 94 IPR004330 -
Lal13g0778 663 PANTHER OS02G0262500 PROTEIN 41 614 - -
Lal13g0778 663 Pfam MULE transposase domain 197 291 IPR018289 -
Lal13g0778 663 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 614 IPR031052 GO:0006355
Lal13g0778 663 ProSiteProfiles Zinc finger SWIM-type profile. 474 512 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0778 Lal-Chr13 5141987 5144259 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal13g0778 MULE 1.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0778 - - lang:109350553 643.269