Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0773 ATGGCAATGGTTGAGTCTCTTACTCTGAGGAATAAGCTGAAGGCTCTTTGTTTGGAAGATGGTTGGTCTTATGCAATTTTCTGGCGCTTTCATCCACATAATCCTTTTTTGTTGACTGCTGAAGATGCATACTATGAAGCACAATTGGGACAAGAGATTCCAAATATGCTTCCACAGACTCAATTATTTGGAGAAGGAATTGTTGGTAAAGCTGCTTTTACTGGCAAGCATATATGGGTGCACTCAGATAGTCAAAGCCAGGAATGGAATTTGTGTAGCCAGAATATTTACAAGGAGGATTATGGATTGCTTCAACATTTCTCATCTGGAATAAAGACAATTGTGGCCATACCTATCATAGCATGTGGAGTGGTACAATTTGGGTCCAAAAAGAAGATTTTGGAAAGAGTTGATTTTTTGGAGCAAATACAGAGATTACTCATGGATATGGAGAATGTGGGTATGGTTGATATGTCAGGAAATGCAGTTTCACTACTGGATTGTGAAAACTATGACTTAAATAGCTTGTTGGCTTCCTTTTCTTCTGAAAATTCATACGACTCGACCTTCGAATATGCTCATGGTGAAAACTCTGAAGACCTAATGAGAAAGTTTTATTCTTATGAAAGTGACAACAATTCATTCCCTTCCCTATATAATGTTTACAACGAAGGGGTGACTTCATTCCATGGAGATTCTTGTGTTGGTGACCAATTGAATGCTACCAATGAAGCTCAAGTTGCATTATATGATACAGATTTCACTAATGTGCTTTTGAGGCCTAACTCTTTGATGAACAACGTAATTTCGAACGACACCAGCTTTGGTGCATGGAATGGCGAAGTTTCATTTTTTGATTCGTTTGAGCAACAATTGGTATCGGCAGATGAAAACACATTTTCTTGTAGTGAAATTGCAGTTCAGGATCCAGCATTGTCTTCAATGTACAGTATGAACATAGGGACATGTCAAGAAAAATTGCAAAGTGCACTGTCCAACCGACAATCTTCTCAATCTGATGTTGTGACAGGAGTTGATTTCCCATCAAGTTCAAACGCACTGCATGGACTCTCTAAGAACATAGAGGCAGTTGATATGTCAGAAGAATTTTTGAAGTTCGGCTCCTCGGATGATCTTTGTCATTGGTTTGCTCCTTCTCCAGATGATAATAACTTTATAGCAATAACTGCATTGGATAACACCCCTTCTGAATCAATTGAGTTTAATCCCACTTCTTTTGTTCGGGTCGGAAATAGTTCCTTAAGTAATATTCCAGTGACATGTTCAGCAGGGGCTAATTCCATAGAAACATCTGCAGTTATGCATACTCCTGAAAATAGTTTCTTCGATTTCAACCGTGATCAAACAAATGATTGGTGGGAGAATATGCCTACACCAGCATTGAGTCCTGCTATCTTTTCTGAATGCATATCAGAGTTAAACACTAGTACACTGACTGGTACACATAATGGATTATTATTCTCAGAGCCCTTGGAGTATGAGTTATCACCAAATAAAAGGAAAGTGGTAGAATTTGCACCATTGAATATAAATGCAATACAATTTGGAAATATTGTGAGGCCTGCTAAGGCTACATCAGACTTGATGGACTCCATTTCTCACTCGGAGAAGACTAACAATCTCGTAAGGAAGAAAGATACACTCCCAAAATTACAGGTACCTAGATGGATTGATGATGGCCATAGCATTAATAATGGAAAGGCTGTTCCTGCACACCAGAAAACTCAAAAGCCAGAGGAGGGTACAACAAAGCGCACTAAGAAACGGGCTAGGCCAAAGGAGAGTACTCGGCCGCGACCAAAAGATCGTCAACAGATCCAAGACTGCATTAAAGAGTTGAGAGGGATCATCCCTAATGGTGAAAAGTATAGCATTGATTCATTGTTAGGCCAAACCATCAGTTACATGCGTTACTTAAAAATTGTAGCCGAGTATGTTGACAAGCTACAAGAACCGATCGAGCTGAAGCTTATTGAACAAGCCAATGAAGTGGCTCTAGAAGACAGTAATGTGGGAGATAACGAAAACTTCGGTGTTACATGGGCAGTTGATTTGGCAAGTCCTACAATGGAATGTCCAATTATAGTAGAGGACATGAACACGCCCGGCCAAATGCGTATCGAGTTTCTTTGTGAGGGTCAGGAGGGTGTTTTTGGCCTTGGTATCGGTCACAACATTGAGTCTATTGGACTGAAAACTTTGAAAGCAGAGATGAAAAGTAGGGAGAACAAATTGTGGGCAGTTTTTATTGTTGAGATTGTGAAACAGGGAAATAGACATTGGACAAGACAAGATGTGTTTTATTTCATTCTCAACCTTATACAGCAAGCATACACCTCCAACATGGATTCAGCCAATGACATTGCAAATGTCATTGATCCTATTGATTCTTGGCTTAGACAATCACCAGAAAAACAGTGA 2442 0.396 MAMVESLTLRNKLKALCLEDGWSYAIFWRFHPHNPFLLTAEDAYYEAQLGQEIPNMLPQTQLFGEGIVGKAAFTGKHIWVHSDSQSQEWNLCSQNIYKEDYGLLQHFSSGIKTIVAIPIIACGVVQFGSKKKILERVDFLEQIQRLLMDMENVGMVDMSGNAVSLLDCENYDLNSLLASFSSENSYDSTFEYAHGENSEDLMRKFYSYESDNNSFPSLYNVYNEGVTSFHGDSCVGDQLNATNEAQVALYDTDFTNVLLRPNSLMNNVISNDTSFGAWNGEVSFFDSFEQQLVSADENTFSCSEIAVQDPALSSMYSMNIGTCQEKLQSALSNRQSSQSDVVTGVDFPSSSNALHGLSKNIEAVDMSEEFLKFGSSDDLCHWFAPSPDDNNFIAITALDNTPSESIEFNPTSFVRVGNSSLSNIPVTCSAGANSIETSAVMHTPENSFFDFNRDQTNDWWENMPTPALSPAIFSECISELNTSTLTGTHNGLLFSEPLEYELSPNKRKVVEFAPLNINAIQFGNIVRPAKATSDLMDSISHSEKTNNLVRKKDTLPKLQVPRWIDDGHSINNGKAVPAHQKTQKPEEGTTKRTKKRARPKESTRPRPKDRQQIQDCIKELRGIIPNGEKYSIDSLLGQTISYMRYLKIVAEYVDKLQEPIELKLIEQANEVALEDSNVGDNENFGVTWAVDLASPTMECPIIVEDMNTPGQMRIEFLCEGQEGVFGLGIGHNIESIGLKTLKAEMKSRENKLWAVFIVEIVKQGNRHWTRQDVFYFILNLIQQAYTSNMDSANDIANVIDPIDSWLRQSPEKQ 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0773 813 MobiDBLite consensus disorder prediction 580 594 - -
Lal13g0773 813 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 47 IPR025610 -
Lal13g0773 813 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 58 146 IPR025610 -
Lal13g0773 813 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 7 801 IPR043561 GO:0003700|GO:0006355
Lal13g0773 813 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 597 646 IPR011598 GO:0046983
Lal13g0773 813 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 610 659 IPR036638 GO:0046983
Lal13g0773 813 MobiDBLite consensus disorder prediction 561 613 - -
Lal13g0773 813 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 7 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0773 Lal-Chr13 5102309 5107260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0773 559 804 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 37.398 7.19e-42 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0773 - - lang:109336274 1444.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0773 13 5102309 5107260 Lal13g0773 13 5102309 5107260 ECH