Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0769 AATCTAATCCTATTGACAGCAGGTCCATTGTCTCATAGTAGTAAATTGGTTGCTATAGCTACTAGGGCTCAGAAATTGAAAAAACACAACCACTTTCCGAAAAGCAAAGCAGAAAAAAGTGTTGTTAGATTTTCTGAATATGATGGCGGTCAACACTGCTCAACGCACAGTCCCAGCCTGAAAAGAAAAAATAAACCGAACAAACTCTTCAACCCTCATTTCCCCCAAATGGCTTTTTCTTCTTCTTTTTCTTCCAGAACTTTCTCCGCCAATCCAAGCGATTACAACCTTCTAGAAGAAGTCGGTGACGGCGCTAGCGCCACCGTCTACCGTGCAATCTACCTCCCAAACAACCGCCAAGTGGCGGTTAAGTGTGTGGATCTAGATCGATGCAACAGCAATCTCGACGACATAAGAAGAGAGGCTCAGACTATGAGCTTAATCGATCACCCTAACGTGGTTCGTGCTTTTTGTTCCTTCGTCGTGGAACGCCACCTTTGGGTGGTTATGCCATTCATGGCGCAGGGTTCTTGTCTGCACTTGATGAAGGCTGCGTATCCCGAGGGATTTGAAGAAGCTATTATCGCGAGTATATTGAAGGAAACTCTGAAAGCTTTGCAGTACCTTCATCGACAGGGTCATATTCATCGCGATGTCAAGGCTGGTAATATTTTGCTTGATGATAATGGTGAAGTTAAGGTGGCGGATTTCGGTGTTTCCGCTTGCATTTATGATTCCGGTGATAGACAACGCTCTAGAAACACTTTTGTTGGAACTCCTTGCTGGATGGCACCAGAGGTATTGCAACCTGGAACTGGTTATAATTCTAAGGCTGATATTTGGTCTTTTGGGATCACAGCACTGGAGTTGGCTCATGGTCATGCCCCCTTTTCAAAATATCCTCCAATGAAGGTTCTTTTGATGACCATCCAAAATGCTCCTCCAGGACTTGATTATGATCGTGATAGAAAGTTCTCTAAGTCTTTTAAGGAAATCGTTGCTATGTGCCTGGTTAAAGATCAAACAAAGAGGCCTTCGGTGGACAAGTTATTGAAGCACTCCTTCTTCAAAAATGCTAAATCTCCTGAGCTATATCTGAAGAGATTATTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAAACACTCCAGATTAAAGACGCAGCTCAACTTGCACTAAAGAAGATGCCTTCTGCTGAAGAAGAAGCATTATCCCAGAGTAAATATCACCGAGGAGTTAGTGCATGGAACTTTGATATTGAGGATCTGAAAGTTCAAGCTTCATTGTTGAGGGACGACGATGATGATATTGCAGAGACAAGGGACGAATTTGAAAACAAACTCTTCACCAGTTACAAGGATACAATCACTGATTCCCAATTTAGCACGGGCAAAAATAATTCAGATAACTTGCAACAAACTGAGTTCATGTTGCAAGTAGGTGGTAATGACACACCACATAATGCGCAGATAAATGGATCGATTGTCGAGACAACACCATCTATCTTAGAGAAAGACATGGTAACAAGCAAGATTAAAAGTCAACCACTACAAATTCGTAAAACTGTAAGTGGGCCGCTTGTGCCAGGCATGGTGCTTGGTCATTCTTTATCTGAAAGAGGGCGCATATTTGAAAGGTCTGGGAATGAAAGTCAGTTGTTAGGTGAGAAAAGTAATCGTGAACTACGAAAAAATCCAAATCTGAGTGGTCCATTAATGCTTCCCAAACGAGCTTCGTCAAATAGTTTATCCGCTCCAATAAAATCTTCCGGAGGACATAGAGATTCCTTAGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGAAGATTCTCAGTGACGTCAGAAAATTTAGATCTGGTGAAGGATCTTCCTGTAAGTTCAGTTTCACGCCAATCTTCACAGGGATCACCACTGAAGAAATCTGCCAGTGTTGGTGATTGGATATCAGATTATAAACAAATGCCAACTGGTCAGCCCTCCACTGATTCTGCCAATACCAATAATCCTGCACCATTTCTTATACCTCAACTTCAGAATCTTTTCCAGCAGACATCTATTCAACAGGATCTTATAATGAATTTGTTAAATAGCTTGCAATCTGCTGAGGTAATTGATGATTCTCAGAATGGAAAGTTGCCACCTTTACCTGGTAGTCCAGAGAACAATGGAAGTGTTGATACGGCAGCTTCGGAGAGGGAACAACTTCTGTTAGCCAAAATTGCAGAACTTCGGGCTCGGATGACCAGTCTGACTGATGAACTAACTTCTGAAAAATTAAAATACAAGCAGTTGCAACAACAGCTAAATGCTGTCTACAGCCAGGAACAAAATAGGGAAAACAAGGAAGCTGCATGA 2361 0.4193 NLILLTAGPLSHSSKLVAIATRAQKLKKHNHFPKSKAEKSVVRFSEYDGGQHCSTHSPSLKRKNKPNKLFNPHFPQMAFSSSFSSRTFSANPSDYNLLEEVGDGASATVYRAIYLPNNRQVAVKCVDLDRCNSNLDDIRREAQTMSLIDHPNVVRAFCSFVVERHLWVVMPFMAQGSCLHLMKAAYPEGFEEAIIASILKETLKALQYLHRQGHIHRDVKAGNILLDDNGEVKVADFGVSACIYDSGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEIVAMCLVKDQTKRPSVDKLLKHSFFKNAKSPELYLKRLFADLPPLWNRVKTLQIKDAAQLALKKMPSAEEEALSQSKYHRGVSAWNFDIEDLKVQASLLRDDDDDIAETRDEFENKLFTSYKDTITDSQFSTGKNNSDNLQQTEFMLQVGGNDTPHNAQINGSIVETTPSILEKDMVTSKIKSQPLQIRKTVSGPLVPGMVLGHSLSERGRIFERSGNESQLLGEKSNRELRKNPNLSGPLMLPKRASSNSLSAPIKSSGGHRDSLDDKSKANLVQIKGRFSVTSENLDLVKDLPVSSVSRQSSQGSPLKKSASVGDWISDYKQMPTGQPSTDSANTNNPAPFLIPQLQNLFQQTSIQQDLIMNLLNSLQSAEVIDDSQNGKLPPLPGSPENNGSVDTAASEREQLLLAKIAELRARMTSLTDELTSEKLKYKQLQQQLNAVYSQEQNRENKEAA 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0769 786 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 84 779 - -
Lal13g0769 786 Gene3D Transferase(Phosphotransferase) domain 1 176 404 - -
Lal13g0769 786 SMART serkin_6 95 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0769 786 ProSiteProfiles Protein kinase domain profile. 95 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0769 786 MobiDBLite consensus disorder prediction 708 729 - -
Lal13g0769 786 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 84 779 - -
Lal13g0769 786 Coils Coil 735 783 - -
Lal13g0769 786 MobiDBLite consensus disorder prediction 574 589 - -
Lal13g0769 786 Pfam Protein kinase domain 95 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0769 786 MobiDBLite consensus disorder prediction 548 601 - -
Lal13g0769 786 SUPERFAMILY Protein kinase-like (PK-like) 93 405 IPR011009 -
Lal13g0769 786 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Lal13g0769 786 Gene3D Phosphorylase Kinase; domain 1 84 172 - -
Lal13g0769 786 CDD STKc_OSR1_SPAK 93 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0769 Lal-Chr13 5077334 5084056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0769 88 778 MAP Kinase Kinase Kinase Kinase AT4G10730 66.381 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lal13g0769 Pkinase 5.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0769 - - lang:109336545 1184.47