Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0758 ATGGCCGCGACCGTTGCTTCCAGATTTTCTCACCGGCGGGGATCCACTTACTCCAAGATTGGCCGTTCTCTTTTTGGTGGATTAAGGAACAACTTCCCTGGTTTACTTACAACATCACATGAATCGACATGCAGCAATTTCTTATCTCAGCAGCAACGTACGTTCATACAGATGAGGACTGTTCTGAAGGTTGTTGATAATTCAGGGGCTAAGAAAGTGATGTGCATTCAAGCTTTGAAAGGGAAGAAAGGGGCAAGATTAGGTGACACTATAATAGCATCAGTGAAGGAAGCCCATCCTAATGGTAAAGTAAAGAAAGGAAAGGTTGTGTATGGAGTAGTTGTAAGAGCTGCTATGCAAAAGGGAAGATGTGATGGGAGTGAGGTTAAGTTTGATGACAATGCTGTGGTGCTTGTTGACAAGCAAGGCCAGCCTATTGGGACCAGAGTTTTTGGGCCAGTTCCACATGAGCTCAGGCAAAAGAAACATGTCAAAATTCTTACTTTAGCAGGGCACATTGCTTAA 525 0.44 MAATVASRFSHRRGSTYSKIGRSLFGGLRNNFPGLLTTSHESTCSNFLSQQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0758 174 SUPERFAMILY Ribosomal protein L14 56 173 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lal13g0758 174 TIGRFAM rplN_bact: ribosomal protein uL14 56 173 IPR005745 GO:0003735|GO:0006412|GO:0015934
Lal13g0758 174 Gene3D Ribosomal protein L14 55 174 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lal13g0758 174 Hamap 50S ribosomal protein L14 [rplN]. 55 174 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal13g0758 174 PANTHER 50S RIBOSOMAL PROTEIN HLP, MITOCHONDRIAL-LIKE ISOFORM X1 29 174 - -
Lal13g0758 174 Pfam Ribosomal protein L14p/L23e 56 173 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal13g0758 174 ProSitePatterns Ribosomal protein L14 signature. 112 138 IPR019972 -
Lal13g0758 174 SMART Ribosomal_L14_2 55 174 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal13g0758 174 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 29 174 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0758 Lal-Chr13 4953197 4955556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0758 66 157 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 36.364 4.18e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0758 K02874 - gmx:100818301 276.174