Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0756 ATGAGCAGCTCCAAGGAGAAACCCACTCTCGGTGGTACGCGGATTAAGACCCGCAAAAGAAATATTGCAGCACCTCTGGACCCTGCATCATTTTCAGATGCAGTGGTCCAGATTTATTTGGACAATAATGGCGATCTGGTTGTTTTCATCGGGGGTCGTACACAACCTGGAACCACCAAGCCTGATGAGGGCGAGAACCATCCTTACTCTGTAATAGAGTGTGAGCCAAAGCGTGAAGTCATTTTGCCATATGTAATCTACATACAAAAGATTTTAAGACGAAGGCCATTTCTAATCAAGAGCCTTGAAAATGTAATGCGACGATTCCTGCAGTCCCTGGAGCTTTTTGAGGAAAATGAGAGGAAAAAGTTGGCAATCTTCACTGCACTTGCATTCTCCCAGAAGCTATCTGGTCTTCCGCCAGAGACTGTGTTCCAGCCACTTTTTAAAGATAATCTTGTGGCCAAAGGACTAGTTCTGTCATTTGTGACTGAGTTCTTTAAGGAGTATCTGATTGACAACAGTCTTGATGATCTTATTTCAATTCTGAAACGGGGGAAAGTGGAAGATAATCTTTTGAACTTTCTTCCTCCTGCAAAAAGATCAAATGAGTTTTTCTCTGAGCATTTCACCAACGAAGGTTTACCAACCTTGGTGGAGTATAATGAGAAGAAAATGTTTGAGGTGAAACTTAAGGAAATGAAGTCTGCTTTAACAACACAGATAACAGAGGAGGCTGATATTGCTGATGTCATAGAAACTGTTAAGCAGCAAGTTAGAGATTCTAAATTGCCTGACATTGAGGTTGTACGGGTCTTGTGGGATGTTTTAATGGATGCTGTTCAATGGTCAGGGAAAAATCAGCAACAGAATGCAAATTCAGCCCTGCGCCAGGTGAAAACTTGGGCAGAACTGTTGAATACATTCTGCAGCAATGGGAATCTTGAGCTTGAACTGATGTACAAAGTTCAGATGCAATGCTATGAGGATGCTAAACTGATGAAGCTGTTCCCTGAGATTATCAGGTCTCTTTATGACCAGGATGTGCTGGCTGAAGATACCATTCTTCACTGGTTCCAAAAAGGAACCAACACCAAGGGCAGGCAAAACTTTGTGAAGGCACTCGAACCCCTTGTCAAATGGCTCGAGGAGGCAGAAGAGGAGGAATAA 1170 0.4291 MSSSKEKPTLGGTRIKTRKRNIAAPLDPASFSDAVVQIYLDNNGDLVVFIGGRTQPGTTKPDEGENHPYSVIECEPKREVILPYVIYIQKILRRRPFLIKSLENVMRRFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLFKDNLVAKGLVLSFVTEFFKEYLIDNSLDDLISILKRGKVEDNLLNFLPPAKRSNEFFSEHFTNEGLPTLVEYNEKKMFEVKLKEMKSALTTQITEEADIADVIETVKQQVRDSKLPDIEVVRVLWDVLMDAVQWSGKNQQQNANSALRQVKTWAELLNTFCSNGNLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILHWFQKGTNTKGRQNFVKALEPLVKWLEEAEEEE 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0756 389 ProSiteProfiles W2 domain profile. 224 389 IPR003307 GO:0005515
Lal13g0756 389 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 47 389 - -
Lal13g0756 389 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 46 - -
Lal13g0756 389 CDD W2_eIF5C_like 194 382 IPR043510 -
Lal13g0756 389 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 47 389 - -
Lal13g0756 389 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 3 46 - -
Lal13g0756 389 Pfam eIF4-gamma/eIF5/eIF2-epsilon 316 389 IPR003307 GO:0005515
Lal13g0756 389 SMART 542_3 303 388 IPR003307 GO:0005515
Lal13g0756 389 Gene3D - 220 389 - -
Lal13g0756 389 SUPERFAMILY ARM repeat 231 386 IPR016024 -
Lal13g0756 389 Coils Coil 99 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0756 Lal-Chr13 4938731 4944015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0756 278 385 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 4.14e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0756 - - lang:109335928 736.487