Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0755 ATGATCAATAATACTAGCTCTATGTCTCGTCCTCATGTCAATCTCATGTCTCCTAATTCTCAGGTTAATGCTACTTATGGAATGATGGCAATGTCAAGATTTCATGGTGAAGCAAGTAACAATGTTCCATTCATGAGAAATATTCACTCAAGAGTACTCATTGATACAAACATGAATGGTTCCAAACATTTGCCTCCTAATCATAGTGTAGAATGGAGGAAAGATGGTGGAAAATGGATAGCCATTTTGACCAAACATCCTAATCCAATGTCTTCATCAATTATTAATAATAATATGAACTCACTGCATTCTTTTGAAGTGTTGTTTCCTCCAACAGTTCCTCATCATGCAAATGCATTTGCTATTAACCATAGAAGCATTCCATTTAGAAGGGATTTTGCTGAGGCTGAAAATGGATATGAGTCCAGAAAAAGGAAAAGAGAAAGCACAGTGATCCAAAATGGTGTTATTTCCAAGACTTCACAGGGTTCAAGAGTTGTAGTTAGAATTAAGAGCATTGAGGACATACCCGATGATGGTTACTCTTGGCGTAAGTATGGACAAAAAATGGTTAAAGGGAACCCTATTGGCCCTAGGTGTTACTTTAGATGCAATATTAGTGGATGTTTAACAAGGAAACAAGTGGAAAGATCAGCAGAAGATGTTAGATATGTGATAATTACCTATGAAGGAAAACATAACCATGAAGTTCCTTCCCCTAAAGGGAAGAATAAGATCACATATGATGATAGTTTTGATGAATTTCCAATATCACTTTCACAACCCGCTGAGTTTAACTATGAGGCATTATTTTATGTGTCCAATATGGTTTCATGTCTCAGCAGTGACTATGCTGAGTCTTCTAACTCTACTACTACTCATGCTGCTGGTGAATCTCTTGCTCCAGCCTCTTCTGCCACTGGTGCAATTCTATTCGATCTCAATCTTCCACTGCCACAAGAACTTCATGATGATGATGATGGTGATGATGATGATGATGTCCCTCTATTGAGTTTGAGATATGAACCAAATCAGAAGGATATAATATGTTCATAA 1056 0.3712 MINNTSSMSRPHVNLMSPNSQVNATYGMMAMSRFHGEASNNVPFMRNIHSRVLIDTNMNGSKHLPPNHSVEWRKDGGKWIAILTKHPNPMSSSIINNNMNSLHSFEVLFPPTVPHHANAFAINHRSIPFRRDFAEAENGYESRKRKRESTVIQNGVISKTSQGSRVVVRIKSIEDIPDDGYSWRKYGQKMVKGNPIGPRCYFRCNISGCLTRKQVERSAEDVRYVIITYEGKHNHEVPSPKGKNKITYDDSFDEFPISLSQPAEFNYEALFYVSNMVSCLSSDYAESSNSTTTHAAGESLAPASSATGAILFDLNLPLPQELHDDDDGDDDDDVPLLSLRYEPNQKDIICS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0755 351 Pfam WRKY DNA -binding domain 178 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal13g0755 351 Gene3D WRKY domain 161 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal13g0755 351 ProSiteProfiles WRKY domain profile. 172 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal13g0755 351 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 29 244 IPR044810 GO:0003700
Lal13g0755 351 SUPERFAMILY WRKY DNA-binding domain 174 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal13g0755 351 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 29 244 - -
Lal13g0755 351 SMART WRKY_cls 177 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0755 Lal-Chr13 4929542 4932604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0755 72 241 WRKY Transcription Factor Family AT5G07100 35.106 4.80e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal13g0755 WRKY 7.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0755 K18835 - lang:109344587 182.956