LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal13g0744	ATGTCTGGAAGCATGAATTGCTTACCGTGTTTTACATCTCAGAAAAGTAAGAAAAGCAATAGCAAGAGGGAACATGGAAATACACCAACGGAAAACGTTATGGCAAAAGCACCTGATATGAAGAAACCAAGGCCAGATGACCCAAACCAAGTTTTTGACCCTGCAAATATTAATGCACAAAATTTCACTTTCCGTGAACTAGCAACTGCAACAAAGAATTTCAGGCAGGAATGTCTGTTGGGTGAAGAAGGCTTTGGCAGAATCTACAAAGGGATTATTCCTGCAACTGGCAAGGTTGTGTCTGTGAAGCAACTCGACCGAAATGCTATGCAAGGTTGCAAGGATTTTCTGGCTGAGGTTTGGGCATTAAGTCTCTTGCACCATGAAAATCTGGTCAATCTCATTGGCTATTGTGCTGATGGGGATCAACGTCTTCTTGTTTATGAATTCATTCAAGCGACACCTCTAGAAATTCGTCTTTTTGAGAAAAAAGGTGATGAGCCTCCATTAGATTGGTATAACAGAATGAAAGTAGCAGCTGGAGCTGCTAGAGGAGTAGAGTACTTGCATGACAGTGCCAACCCACCAGTTATATACCGGGACTTGAAAGCCTCAAATATTTTACTGGATGAGAATCTGAATGTAAGTTTAAGTGATTTTGGAATGGCCAAGTTTACTGGTGGAGATAATAAAATGACCCCTTCACCTGCAAGAGTTATGGGTACTTATGGTCATTGTGCTCCAGAGTATGTGAGAACAGGTCAAGTCACTATTAAATCAGATGTATATAGTTTTGGAATTGTCTTGCTAGAGCTCATAACCGGACGACGAGCCGTTGATACCAGAAGACCGAATGAGGAGCAAAACCTAGTTTCATGGGCACAACCCTTATTCAGGGACCCAAAAAGGTTTCCAGATATGGCAGATCCACTTCTTGATAAGCAGTTCCCAGAAAAGGATCTCAACCAAGCTGTTGCAATAGCAGCAATGTGCTTACAAGAGGAACCAGAAGCCCGTCCTTTGATTAGTGATGTTGTAACTGCTCTGAGTTTTCTTTCCATTGTTCCTCCTGCGGATGCTATTCCACCTTCCGTCTCACATGCCGCATCGATCTCTAAGCATAGTGAAGGTGCAAGTGAAAGTGAAAGTGAAAGCGGAAGCGAATATGGAAGTGGAAGCGAAGAAGGGGTTGATAAGGAGAGCCGCAGAAGATATAGTTCAAAGAAAGGTTCTTCTAAGTATCAGGGTGGATCAAGTTCAAAATACCAAGAAAGTGATGTTTCAGAAGATACAATGGGAAGCAAGGAGTTTTACTCCAAATCAAGCCGCAAAAGCAGCACAAGATCAAGGAATGGAACAATCACTTCAGAACAAGAAGATGGAAGTGTTTCTTCCAGCAACAAAAGTAGTAGGAAACCACACGGAAATTAA	1431	0.4214	MSGSMNCLPCFTSQKSKKSNSKREHGNTPTENVMAKAPDMKKPRPDDPNQVFDPANINAQNFTFRELATATKNFRQECLLGEEGFGRIYKGIIPATGKVVSVKQLDRNAMQGCKDFLAEVWALSLLHHENLVNLIGYCADGDQRLLVYEFIQATPLEIRLFEKKGDEPPLDWYNRMKVAAGAARGVEYLHDSANPPVIYRDLKASNILLDENLNVSLSDFGMAKFTGGDNKMTPSPARVMGTYGHCAPEYVRTGQVTIKSDVYSFGIVLLELITGRRAVDTRRPNEEQNLVSWAQPLFRDPKRFPDMADPLLDKQFPEKDLNQAVAIAAMCLQEEPEARPLISDVVTALSFLSIVPPADAIPPSVSHAASISKHSEGASESESESGSEYGSGSEEGVDKESRRRYSSKKGSSKYQGGSSSKYQESDVSEDTMGSKEFYSKSSRKSSTRSRNGTITSEQEDGSVSSSNKSSRKPHGN	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal13g0744	476	MobiDBLite	consensus disorder prediction	428	443	-	-
	Lal13g0744	476	MobiDBLite	consensus disorder prediction	368	390	-	-
	Lal13g0744	476	PANTHER	RECEPTOR-LIKE KINASE LIP1	5	427	-	-
	Lal13g0744	476	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	197	209	IPR008271	GO:0004672\|GO:0006468
	Lal13g0744	476	SUPERFAMILY	Protein kinase-like (PK-like)	54	354	IPR011009	-
	Lal13g0744	476	CDD	STKc_IRAK	80	349	-	-
	Lal13g0744	476	Pfam	Protein kinase domain	76	346	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal13g0744	476	MobiDBLite	consensus disorder prediction	410	427	-	-
	Lal13g0744	476	MobiDBLite	consensus disorder prediction	1	51	-	-
	Lal13g0744	476	Gene3D	Phosphorylase Kinase; domain 1	58	150	-	-
	Lal13g0744	476	SMART	serkin_6	74	352	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal13g0744	476	MobiDBLite	consensus disorder prediction	444	476	-	-
	Lal13g0744	476	PANTHER	OS07G0668900 PROTEIN	5	427	-	-
	Lal13g0744	476	MobiDBLite	consensus disorder prediction	1	16	-	-
	Lal13g0744	476	ProSiteProfiles	Protein kinase domain profile.	74	352	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal13g0744	476	MobiDBLite	consensus disorder prediction	364	476	-	-
	Lal13g0744	476	MobiDBLite	consensus disorder prediction	393	407	-	-
	Lal13g0744	476	Gene3D	Transferase(Phosphotransferase) domain 1	156	354	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal13g0744	Lal-Chr13	4849158	4852674	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal13g0744	5	356	Glycoside Hydrolase	AT3G07070	60.606	1.08e-156	449

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Lal13g0744		Pkinase	3.5e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal13g0744	-		-	lang:109335196	850.121