Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0734 ATGGAAGACAATGACAACACCAACACCACCAACAACAACAACCTCGCCTCCTACTTCCACCACTTCAACCACCACCACCACCACCAAGAAACCACCGTGTCTCCGACCAATGGAGTGTTTCCTTCAACCACTGATGGGTCCCACTCCCACTCTCACATGCTGTACCCTCACACCACCACAACCACCGCACCAGCAACTACTGTAATTCCCTCGTCCCAATTTCAAAAGAAGAAGAGAGGGAGACCTAGAAAATACGCTTCTCCAGAACAAGCTCTTGCTGCTAGGAACCTCAATACGACATCGTTTTCTCCTTCCCATGCACCCTCTCCCGTTCCTCTCTCTGTTTCTTCTTTCAACAAATCTTCTCACTCATTCTCTCTAGGCACTGCAGGACAAGACTTCACTACACATTTTATTACTGTTCTTGCTGGTGAGGATGTTGGTCAAAAAATTATGTTGTTCATGCAACAAAGCAGGCGTGAGATCTGCATTTTGTCTGCATCTGGTTCGATCTCTAATGCATCTCTTAATCAGCCAGCAACATCAGGAGGCAGTATTACATATGAGGGTCGGTTTGAGATTGTTTCACTTAATGGTTCCTATATCCGTAACGAAGTCGGAAGTCGATCTGGTGGTCTCAGTGTATGTTTATCTAATACTGATGGGCAAATCATAGGTGGTGGTGTTGGTGGACCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATCGTTGGCACGTTCATTGTTGACCCCAAGAAGGATGCTAGAGCTGGAATTAAAGGTGACATTTCTTCCAGCAAGTTGCCACCACCACCAGTCAGCGAATCAGTATCAAGCTTTGGTTTCGGCCGAGCAGTTGACTCTTCTACTGGGAATCCAATAAGGGGAAATGAGGAACATCAGACTATTGGAGGAAGTCATTTCATGATTCAACAAGGTGGTATGCAAGGGACACATTCCCATCACTCTGACTGGGGAGATCATCCGGATTCAAGAAATGCCGACTTTGAACTGTCAGGAAGAACTGGTCATGGAGCACATCAGTCACACGATGAGAACGGGGACTACGAGTAA 1071 0.4678 MEDNDNTNTTNNNNLASYFHHFNHHHHHQETTVSPTNGVFPSTTDGSHSHSHMLYPHTTTTTAPATTVIPSSQFQKKKRGRPRKYASPEQALAARNLNTTSFSPSHAPSPVPLSVSSFNKSSHSFSLGTAGQDFTTHFITVLAGEDVGQKIMLFMQQSRREICILSASGSISNASLNQPATSGGSITYEGRFEIVSLNGSYIRNEVGSRSGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFIVDPKKDARAGIKGDISSSKLPPPPVSESVSSFGFGRAVDSSTGNPIRGNEEHQTIGGSHFMIQQGGMQGTHSHHSDWGDHPDSRNADFELSGRTGHGAHQSHDENGDYE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0734 356 MobiDBLite consensus disorder prediction 32 74 - -
Lal13g0734 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 350 IPR039605 GO:0003680
Lal13g0734 356 MobiDBLite consensus disorder prediction 259 356 - -
Lal13g0734 356 CDD DUF296 135 246 IPR005175 -
Lal13g0734 356 ProSiteProfiles PPC domain profile profile. 128 270 IPR005175 -
Lal13g0734 356 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 247 - -
Lal13g0734 356 MobiDBLite consensus disorder prediction 280 318 - -
Lal13g0734 356 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 246 IPR005175 -
Lal13g0734 356 MobiDBLite consensus disorder prediction 25 89 - -
Lal13g0734 356 Gene3D - 135 261 - -
Lal13g0734 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 350 - -
Lal13g0734 356 MobiDBLite consensus disorder prediction 320 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0734 Lal-Chr13 4802327 4805880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0734 45 356 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 47.181 1.42e-74 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0734 - - lang:109345383 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0734 13 4802327 4805880 Lal13g0734 13 4802327 4805880 ECH