Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal13g0722 | ATGATGAGGGCACCTTGCTGTGATAAAATGGGATTGAAGAAGGGACCTTGGACACCTGAAGAAGATCATATATTGATTACTCATATTCAAAAATATGGTCATCAAAATTGGCGTGCCCTTCCAAAACAAGCTGGTTTGTTAAGGTGCGGTAAAAGTTGTAGACTTCGTTGGATAAATTACTTGAGGCCTGATATTAAACGAGGTAATTTCAGCCATGAAGAAGAAGAGACAATCCTCAAGCTACATGGAATTCTTGGAAATAAATGGTCTGCTATTGCGGCGAGATTACCCGGTCGAACCGATAATGAAATAAAGAATTTTTGGTACACTCATTTGAAGAAGAGGGCTGAGAGAAGCCAAATGCAGAGTATGAGTAATAGCACCTCATTTCCCTTAGAAAAGGCACAAGCAAGTTGTAGTTCAGAGGCTGAAATAAGAATGGCACAAGTAGCAAAAGATGCATCAAATGCTACTACTACTTCCAATGAGAAAAATCCACCAATTGTAGGTGTAGGATTTTACAGCACAGAAGCCTCTAATGGTTGCAATGAGATTGATGAAGAAATGGAATTTTGGTACAATCTATTCATCCAAACAGGGCATTAG | 606 | 0.3911 | MMRAPCCDKMGLKKGPWTPEEDHILITHIQKYGHQNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSHEEEETILKLHGILGNKWSAIAARLPGRTDNEIKNFWYTHLKKRAERSQMQSMSNSTSFPLEKAQASCSSEAEIRMAQVAKDASNATTTSNEKNPPIVGVGFYSTEASNGCNEIDEEMEFWYNLFIQTGH | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal13g0722 | 201 | PANTHER | MYB TRANSCRIPTION FACTOR | 1 | 200 | - | - | |
| Lal13g0722 | 201 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
| Lal13g0722 | 201 | Pfam | Myb-like DNA-binding domain | 67 | 112 | IPR001005 | - | |
| Lal13g0722 | 201 | CDD | SANT | 69 | 112 | IPR001005 | - | |
| Lal13g0722 | 201 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
| Lal13g0722 | 201 | CDD | SANT | 16 | 61 | IPR001005 | - | |
| Lal13g0722 | 201 | SUPERFAMILY | Homeodomain-like | 10 | 108 | IPR009057 | - | |
| Lal13g0722 | 201 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
| Lal13g0722 | 201 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 200 | - | - | |
| Lal13g0722 | 201 | Gene3D | - | 69 | 138 | - | - | |
| Lal13g0722 | 201 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
| Lal13g0722 | 201 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
| Lal13g0722 | 201 | Gene3D | - | 13 | 66 | - | - | |
| Lal13g0722 | 201 | SMART | sant | 66 | 114 | IPR001005 | - | |
| Lal13g0722 | 201 | SMART | sant | 13 | 63 | IPR001005 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal13g0722 | Lal-Chr13 | 4725674 | 4727861 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal13g0722 | 1 | 119 | MYB Transcription Factor Family | AT2G31180 | 77.311 | 2.15e-69 | 210 |
Transcription factors information