Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0713 ATGGGGACTCCTGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGACCCAGAGGTATCTTGGATTGATGGACAGGTATCAAAAATCAATGGAAAAGATGCTGAAATTGAAACTACCAATGGAAAAAAGGTTGTTGCAAGTTTATCAAAAATATTACCCAAAGATATGGAAGCTCCTCCTGGTGGAGTGGATGATATGACTAAGCTGTCCTATTTGCACGAACCTGGAGTCCTTCAGAACTTAAAAATTAGATATGAATTGAATGAAATATATACTTACACTGGAAATATTTTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGGAGCGCACATGATGCACCAATACAAGGGAGCACCATTTGGAGAATTAAGTCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGAGCGATGATTCATGAAGGAAAAAGTAATTCAATTCTGGTCAGTGGAGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCAATACCTTGCTTTCTTAGGTGGTAGGGCTGCAACTGAAGGACGAACAGTTGAACAGCAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCTAGTCGTTTCGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCTATCCGAACTTACCTTCTAGAGAGATCTCGGGTTTGCCAAGTTAATGATCCCGAACGCAACTACCACTGCTTTTATCTTCTTTGTAATGCACCACAGGAGGAAGTTGAGAAATACAAATTAGGAAATCCTAGATCATTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGATGTAAGTGATGCTCGTGAGTATCTTGCCACCCGGAGAGCAATGGATATTGTTGGAATAAGCCAAAAAGACCAGGAAGCCATTTTCAGAGTTGTTGCTGCGATTCTTCATATTGGTAATATTGAATTTACTAAAGGAAAGGAGGTTGACTCTTCAATTCCGAAAGATGACACAGCCAAATTCCACTTGAAAACAACTGCTGAGCTTCTCATGTGTGATATTGATGCCTTGGAAGACGCATTATGTAAGCGTGTCATGATAACCCCTGAAGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAGCAGTCAGTAGAGATGGATTGGCAAAAACACTTTATTCTCGTCTTTTTGACTGGTTGGTGGACAAGATTAACAATTCAATCGGACAAGACCCTAATTCTAAATGTTTGATTGGAGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCCAACAGCCTGTCATGCTCTGCAGTTTTGAACAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGGCAAAGTCTCAGACCACATTACACACTTCAACACGTGTTTAAAATGGAACAAGAAGAATATACCAAGGAGCAGATTGATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTCTGGACCTTATTGAAAAGAAACCCGGAGGAATCATTGCACTCCTCGATGAAGCTTGCATGTTTCCAAAGTCAACACACGAAACATTTGCGAATAAGCTTTATCAAACATTTAAAGTTCACAAGCGCTTTATTAAGCCAAAATTGTCTCGAACGGATTTCACTGTTGCTCATTATGCTGGGGAGGTGACATACCAGTCTGACCAATTTTTAGACAAAAACAAGGATTACGTGGTTCCTGAACATCAAGATTTATTGGGTGTTTCCAAATGTTCTTTTGTAGCTGGCCTTTTCCCCCCACTTCCAGAAGAGTCGTCAAAATCTTCCAAATTTTCTTCAATTGGCTCGCGCTTTAAGTTACAACTACAGCAACTAATGGAAACATTGAATTCTACAGAACCCCATTACATTAGATGCGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATATGAACATTATGCAACAACTTCGCTGTGGTGGCGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGTCGTCCTTTCTTTGATTTTGTAAACAGATTTGGCCTCCTTGCCTCTGAGGCCATGGAAGCAAACTATGATGAAAAGGCTGTTTGCAAGAAGATTCTGGATAAGATGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTAGATGGACGGAGAGCTCAAGTACTTAGTAATGCAGCAAAATCTATTCAACGGCGTGTACGGACCCATCAAGCTCGTAGACATTATCTTGCATTGCGGAAGAAGACCATATATGTGCAGTCTCGTTGGAGAGGGAGACTTGCTTGTAAACTCTATGACGGCTTGAGAAGGGAGGCTGCTGCTAAGAAAATTCAAAAGAATGTACGCAGATATGAAGCTAGGAAAGCCTATAAAGAACTTCATGTGGCAGCACTTTCATTGCAAACAGCTTTAAGAGCAATTGCTGCTCGTAAAGAGTTCAGATTTAGGAAGCAGACTAAAGCCTCCATCATTATTCAGGCTCAGTGGCGAAAACACAAGGCTGCCTTATATTATAAGAGGCTCAAGAGGGGTACAGTCGTTACACAATGCAGATGGAGAGGGCGTGCGGCCAGAAGAGAGCTTAGGAAACTGAAAATGGCAGCGAAGGAAACTGGTGCACTTCAAGAAGCAAAGGATAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGCCTCCAACTAGAAAAAGGTTTAAGGACCAATGTGGAAGAATCCAAAGCCCAAGAGATAGCAAAACTGCAGAATTTATTGCAGGAGATGCAGAGCAAACTTGATGAAACCAATGCTCTGCTTGTCAAGGAGCGAGATAATGCAAAGAAAGTTGTCGAAGAAGCACCTCCTGTTGTTAAAGAAACTCAGGTTGTTGTTGAAGATACACACAAGATTGAGGCATTAACAGCAGAAATCGAGAGCCTAAAGACTTCATTTGCGTCAGAGAAGCAGAAAGCTGATGACTTTGAAAGAAAATATAATGAAGCTCAAGTTTGTAGTGAAGAAAGGGGTAAAAAAATAGAAGACTTGGAGAAGAAGGTTCGTCAGCTCCAAGAATCATTGACCAGGCTAGAGGAGAAGAATAGTAATATAGAGTCGGAGAATCAGGTTCTACGTCAACAAGCTGTATCCATGGCAGCTGCACCTGCTAAGCACCTTTCAGGACGGTCCAGATCAATTATCCAGAGAGGTGCTGAAAGTGGTCATATTCCAGTGGAAGCGAAGACACATTCGACCAATCAGGAACTGCATCAGAGTCCATCTATGAGCCAGAGGGAATCCTCTGAAGTGGATGATAAACCCCAAAGGTCACTAAATGAGAAACAACAAGAGAATCAAGAGTTACTCATTAGGTGTATCGCACAACATCTAGGCTTTGGTGGGAACAGACCAATTGCTTCCTGTATCATATACAAATGTCTCTTGCATTGGAGATCATTTGAAGTTGAGCGTACTAGCGTTTTTGATCGTATCATTCAAACTATTGGCCATGCAATTGAGACTCAGGATAACAATGACGTGTTAGCTTATTGGTTATCCAATGCCTCAACACTTCTCTTGTTACTCCAGCGCACACTCAAGGCAAGCGGTGCTGCTGGGATGGCTCCACAACGCCACCGTCGTTCTTCGTCAGCAACTCTTTTTGGGAGGATGACTCAAAGTTTCCGTGGAACTCCAACAGGAGTCAATCTTTCTTTAATCAATGGTAGCTCGAGCAGAGGGGTAGAAACATTAAGACAAGTTGAAGCCAAATACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATCCGTGATAACTTAAAGAAAGAAATTTCACCCCTGCTTGGTTTATGCATCCAGGCACCGAGAACATCCAGAGCAAGCTTGGTTAAGGGATCATCACGTTCTGTCGCAAACACTGAAGCCCAGCGCACTTTGATTGCTCACTGGCAGGGGATAGTTAAGAGCCTAGGGAACTTCTTAAATACTTTGAAAGCAAATCATGTCCCCCCATTTTTGGTTCGCAAGGTTTTCACACAAATTTTTTCTTTCATCAATGTACAATTATTCAATAGTCTTCTACTAAGACGAGAGTGCTGCTCATTTAGTAATGGAGAATATGTCAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCAACAGATGAGTATGCTGGTTCAGCTTGGGATGAGCTCAAACATATTAGACAGGCTATTGGTTTTCTGGTCATACATCAGAAACCAAAGAAAACTCTGGATGAAATAAGTCATGATCTGTGCCCAGTCCTTAGTATACAGCAGCTATATCGAATTAGCACCATGTACTGGGATGATAAGTATGGCACGCATAGTGTCTCCCCTGATGTCATTTCCAATATGAGAGTGTTGATGACTGAGGATTCAAATAACGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATATCGAAGTCCATGGAACAGATAGATATCGCTGACATAGATCCCCCACCACTAATTCGTGAAAACTCAGGCTTTAGCTTTTTGTTGCCACGCCCAGATTGA 4662 0.4123 MGTPVNIIVGSHVWIEDPEVSWIDGQVSKINGKDAEIETTNGKKVVASLSKILPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYGAHMMHQYKGAPFGELSPHVFAVADVAYRAMIHEGKSNSILVSGESGAGKTETTKMLMQYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCNAPQEEVEKYKLGNPRSFHYLNQSKCYELADVSDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHIGNIEFTKGKEVDSSIPKDDTAKFHLKTTAELLMCDIDALEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTLYSRLFDWLVDKINNSIGQDPNSKCLIGVLDIYGFESFKSNSLSCSAVLNSFALISQMRSCSNISIRQSLRPHYTLQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKVHKRFIKPKLSRTDFTVAHYAGEVTYQSDQFLDKNKDYVVPEHQDLLGVSKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENMNIMQQLRCGGVLEAIRISCAGYPTRRPFFDFVNRFGLLASEAMEANYDEKAVCKKILDKMGLKGYQIGKTKVFLRAGQMAELDGRRAQVLSNAAKSIQRRVRTHQARRHYLALRKKTIYVQSRWRGRLACKLYDGLRREAAAKKIQKNVRRYEARKAYKELHVAALSLQTALRAIAARKEFRFRKQTKASIIIQAQWRKHKAALYYKRLKRGTVVTQCRWRGRAARRELRKLKMAAKETGALQEAKDKLEKRVEELTWRLQLEKGLRTNVEESKAQEIAKLQNLLQEMQSKLDETNALLVKERDNAKKVVEEAPPVVKETQVVVEDTHKIEALTAEIESLKTSFASEKQKADDFERKYNEAQVCSEERGKKIEDLEKKVRQLQESLTRLEEKNSNIESENQVLRQQAVSMAAAPAKHLSGRSRSIIQRGAESGHIPVEAKTHSTNQELHQSPSMSQRESSEVDDKPQRSLNEKQQENQELLIRCIAQHLGFGGNRPIASCIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRHRRSSSATLFGRMTQSFRGTPTGVNLSLINGSSSRGVETLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRTLIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDIADIDPPPLIRENSGFSFLLPRPD 1553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0713 1553 Coils Coil 893 920 - -
Lal13g0713 1553 Pfam Myosin head (motor domain) 64 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 SMART DIL_2 1371 1478 IPR002710 -
Lal13g0713 1553 CDD MyosinXI_CBD 1133 1519 IPR037975 GO:0007015
Lal13g0713 1553 Gene3D - 439 639 - -
Lal13g0713 1553 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 PRINTS Myosin heavy chain signature 498 526 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 ProSiteProfiles IQ motif profile. 751 778 IPR000048 GO:0005515
Lal13g0713 1553 Gene3D - 683 745 - -
Lal13g0713 1553 PANTHER MYOSIN 6 1550 - -
Lal13g0713 1553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 801 IPR027417 -
Lal13g0713 1553 Coils Coil 991 1018 - -
Lal13g0713 1553 Gene3D Kinesin motor domain 65 678 IPR036961 -
Lal13g0713 1553 ProSiteProfiles Myosin motor domain profile. 62 748 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 ProSiteProfiles Dilute domain profile. 1182 1496 IPR002710 -
Lal13g0713 1553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 801 899 IPR027417 -
Lal13g0713 1553 PANTHER MYOSIN-9 6 1550 - -
Lal13g0713 1553 Coils Coil 1026 1067 - -
Lal13g0713 1553 ProSiteProfiles IQ motif profile. 799 828 IPR000048 GO:0005515
Lal13g0713 1553 ProSiteProfiles IQ motif profile. 774 803 IPR000048 GO:0005515
Lal13g0713 1553 MobiDBLite consensus disorder prediction 1101 1118 - -
Lal13g0713 1553 Pfam IQ calmodulin-binding motif 801 820 IPR000048 GO:0005515
Lal13g0713 1553 Pfam IQ calmodulin-binding motif 848 868 IPR000048 GO:0005515
Lal13g0713 1553 Pfam IQ calmodulin-binding motif 753 771 IPR000048 GO:0005515
Lal13g0713 1553 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 MobiDBLite consensus disorder prediction 1119 1133 - -
Lal13g0713 1553 Coils Coil 928 966 - -
Lal13g0713 1553 ProSiteProfiles IQ motif profile. 870 899 IPR000048 GO:0005515
Lal13g0713 1553 MobiDBLite consensus disorder prediction 1101 1134 - -
Lal13g0713 1553 Gene3D - 801 848 - -
Lal13g0713 1553 Gene3D - 849 898 - -
Lal13g0713 1553 Gene3D - 750 800 - -
Lal13g0713 1553 Gene3D Myosin VI head, motor domain, U50 subdomain 312 617 - -
Lal13g0713 1553 ProSiteProfiles IQ motif profile. 847 874 IPR000048 GO:0005515
Lal13g0713 1553 Gene3D - 252 310 - -
Lal13g0713 1553 SMART MYSc_2a 57 749 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 Pfam DIL domain 1372 1475 IPR002710 -
Lal13g0713 1553 SMART iq_5 846 868 IPR000048 GO:0005515
Lal13g0713 1553 SMART iq_5 773 795 IPR000048 GO:0005515
Lal13g0713 1553 SMART iq_5 869 891 IPR000048 GO:0005515
Lal13g0713 1553 SMART iq_5 750 772 IPR000048 GO:0005515
Lal13g0713 1553 SMART iq_5 821 843 IPR000048 GO:0005515
Lal13g0713 1553 SMART iq_5 798 820 IPR000048 GO:0005515
Lal13g0713 1553 CDD MYSc_Myo11 76 736 IPR036018 -
Lal13g0713 1553 Pfam Myosin N-terminal SH3-like domain 9 49 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal13g0713 1553 ProSiteProfiles IQ motif profile. 822 851 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0713 Lal-Chr13 4648117 4663871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0713 1 1553 Myosins gene family AT1G54560 81.198 0.0 2638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0713 K10357 - gmx:100816792 2690.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0713 13 4648117 4663871 Lal13g0713 13 4648117 4663871 ECH
Lal13g0713 13 4648117 4663871 Lal24g0806 24 6369744 6393004 LSH
Lal11g1104 11 14724703 14739239 Lal13g0713 13 4648117 4663871 PCT
Lal1g1868 1 20954802 20967651 Lal13g0713 13 4648117 4663871 PCT
Lal18g0232 18 1922471 1933349 Lal13g0713 13 4648117 4663871 PCT
Lal13g0713 13 4648117 4663871 Lal11g1104 11 14724703 14739239 PCT
Lal13g0713 13 4648117 4663871 Lal1g1868 1 20954802 20967651 PCT