Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0710 ATGCATGCCATCAATGCCCTTGTATCTCTTCTTTGCACCCTTGTTTTTTTGAATTCCCTTATTCATGCATCAAGCAAGGACTCAGATCCATTGATCTTAGGGTGTGGCTTAGGAGAAGGTGGTGGCAAAGATGATGATGGAAGACAATGGTTACCTGACAACAAATATGTTTCAGGAGGCAATTCCATTACATCTAAAGCCTCATTCCAAGACCCTTCACTTTTGTCTGTGGTTCCATACATGACAGCAAGAATTTTCACATCAGAAGCAACGTATAAATTCCCTGTTCAACCATATAAGCGTTACTGGCTCAGGCTCCATTTCTACCCCTCTGTTTATGAGAGTTATAATCCTTCCAATTCATATTTCTCTGCCATTGCAAATGGTGTTACCCTTCTCAGCAATTTCAGCGCCTCAATTACTTGCCAGGCCCTCTCACAAGCGTATCTTGATAGAGAGTATTCGCTTGCGCCTTTGAATTCGGATACTCTCACCCTTGTATTTAAGCCTTCTGATAAGTACAATAGGGCTTTTGCTTTTGTCAATGGCATTCAGCTTATCCAAATGCCTGAGTTGTTTGATTCTGCTTCATTGGTGGGGTATGCTGACCAATCCGTGGACGCGAAAAGTTTACATTTGCAAACAATGTTTAGATTAAATGTTGGTGGGCAATACATATCTCCGAATCAAGATTCTGGTCTAAGCAGAATGTGGTATGATGATACACCTTATATATATGGTGCAGCCACTGGTGTCACCAACCAAGTTGCCAAGGATGTTAAAATTGACTACCAAACAATGCCTCAGTACATTGCTCCTTCTAGTGTCTACTCCACATCAAGATCCATGGGCAATAATAAGGATATCAATATGGGGTACAATCTCACATGGATTTTCCAAGTTGATCCAAATTCAATGTACCTTACAAGGTTGCATTTCTGTGATTATTATTATTCCAAAGTCAATGAGATTGTTTTCAATATATATGTCAACAACCAAACGGCGCAGACTCAAGCTGATGTAATTGGATGGACAGGAGGTAAAGGAGTACCAACTTACAAAGACTATGTGGTGTATGTGCAAGATCAGGCAGGTGAAGATACACTTTGGCTTGCTCTGCACCCAGCACAGGATACAAAGCCTGAGTATTATGATGCTATACTCAATGGAGTGGAGATATTCAAACTCAATGACACAAACTTGTCTGGGCCTAATCCTCAGCCTTCGGAAATGATGGTTGAACATGAGGAGGAAAAAAAGTTCGAAGATAAAGATACACATTATAGCAAGAATGTTGTTATTGGTGGAGCTGCTGGAAGTGCTATAGGTGTTGCCTTAGTGGCAGCAATATGTGTTGTTGTACACAAAAAGAAGATGTCTCCTGGATCATACTCACACAACTCAAGCTGGCTTCCTCTCTATGGAAATTCACTCTTAAGCGGCAACTCCAAATCTACAATTTCTGGAAAGAGTACTGTTGGCAGTACCAACTTATCAGCCATGGCTCAAGGACTGTGCCGCTATTTCTCGTTACAAGAGATGAAGCAAGCGACCAAGAATTTTGATGAGGCAAATGTTATTGGTGTTGGAGGGTTCGGAAAGGTTTACAAGGGTGTCATTGATAATGGCCTTAAAGTGGCTATCAAAAGATCTAACCCTCAATCAGAACAAGGAGTTAATGAATTCCAGACTGAGATTGAGATGCTTTCTAAACTAAGACACAAGCATTTGGTGTCATTGATTGGATTCTGTGAGGAAGATGAGGAAATGTGCTTGGTTTACGACTTCATGGCACTTGGCACCATGAGAGAACATCTTTACAAAGGAAACAAACCAATAAGTACTCTTTCATGGAAACAAAGGTTGGAGATATGCATTGGAGCAGCTAGAGGCCTTCATTATCTTCACACTGGGGCAAAATACACCATCATTCATAGAGATGTAAAAACAACTAACATTCTCCTTGATGAAAACTTTGTTGCCAAGGTTTCAGATTTTGGATTGTCAAAAACTGGTCCAAACATGAACCAAGGTCATGTTAGCACTGTGGTGAAGGGTAGTTTTGGATACTTAGATCCTGAATATTTCAGGAGGCAACAATTGACTGAGAAATCTGATGTATACTCATTTGGGGTTGTCCTGTTTGAGGCTCTTTGTGCAAGGCCTGCTCTGAACCCTAGCCTTCCAAAGGAACAAGTGAGCCTAGCTGAATGGGCTTTGTCATGCAAAAGAAAAGGGGCATTGGATGATATCATTGACCCTAGTCTCAAGGGAAAGATCAACCCTGAAAGCTTGAAGAAGTTTGCAGATACAGCTGAGAAGTGTTTGTCTGATCATGGACTCGATCGGCCATCCATGAATGATCTGTGTTGGAATCTAGAATTTGCTCTCAACCTGCAAGAGAACCCTGATGGTTCATCTTCCTCTTCATCAAATGTTGTCGAAGGTGAGTTTGAAGAAGTAAGCTTGCAAGACAACAACAACAAAAAAAACAACAACGGCACGGAGTGA 2511 0.4122 MHAINALVSLLCTLVFLNSLIHASSKDSDPLILGCGLGEGGGKDDDGRQWLPDNKYVSGGNSITSKASFQDPSLLSVVPYMTARIFTSEATYKFPVQPYKRYWLRLHFYPSVYESYNPSNSYFSAIANGVTLLSNFSASITCQALSQAYLDREYSLAPLNSDTLTLVFKPSDKYNRAFAFVNGIQLIQMPELFDSASLVGYADQSVDAKSLHLQTMFRLNVGGQYISPNQDSGLSRMWYDDTPYIYGAATGVTNQVAKDVKIDYQTMPQYIAPSSVYSTSRSMGNNKDINMGYNLTWIFQVDPNSMYLTRLHFCDYYYSKVNEIVFNIYVNNQTAQTQADVIGWTGGKGVPTYKDYVVYVQDQAGEDTLWLALHPAQDTKPEYYDAILNGVEIFKLNDTNLSGPNPQPSEMMVEHEEEKKFEDKDTHYSKNVVIGGAAGSAIGVALVAAICVVVHKKKMSPGSYSHNSSWLPLYGNSLLSGNSKSTISGKSTVGSTNLSAMAQGLCRYFSLQEMKQATKNFDEANVIGVGGFGKVYKGVIDNGLKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDEEMCLVYDFMALGTMREHLYKGNKPISTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENFVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLAEWALSCKRKGALDDIIDPSLKGKINPESLKKFADTAEKCLSDHGLDRPSMNDLCWNLEFALNLQENPDGSSSSSSNVVEGEFEEVSLQDNNNKKNNNGTE 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0710 836 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 828 - -
Lal13g0710 836 Pfam Malectin-like domain 34 395 IPR024788 -
Lal13g0710 836 Gene3D Transferase(Phosphotransferase) domain 1 597 815 - -
Lal13g0710 836 PANTHER OS07G0166700 PROTEIN 20 828 IPR045272 GO:0004714|GO:0006468
Lal13g0710 836 ProSiteProfiles Protein kinase domain profile. 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0710 836 MobiDBLite consensus disorder prediction 802 817 - -
Lal13g0710 836 Gene3D - 35 190 - -
Lal13g0710 836 Gene3D - 211 397 - -
Lal13g0710 836 CDD STKc_IRAK 527 789 - -
Lal13g0710 836 SMART serkin_6 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0710 836 SUPERFAMILY Protein kinase-like (PK-like) 497 796 IPR011009 -
Lal13g0710 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lal13g0710 836 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Lal13g0710 836 Gene3D Phosphorylase Kinase; domain 1 482 596 - -
Lal13g0710 836 Pfam Protein tyrosine and serine/threonine kinase 525 788 IPR001245 GO:0004672|GO:0006468
Lal13g0710 836 MobiDBLite consensus disorder prediction 802 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0710 Lal-Chr13 4612978 4615488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0710 19 833 Receptor kinase-like Gene Family AT3G51550 54.306 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal13g0710 Malectin_like 5.4e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0710 - - gmx:100815737 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0710 13 4612978 4615488 Lal24g0544 24 3833963 3836569 LSH
Lal3g1581 3 21539365 21541905 Lal13g0710 13 4612978 4615488 PCT
Lal18g0229 18 1907078 1909693 Lal13g0710 13 4612978 4615488 PCT
Lal13g0710 13 4612978 4615488 Lal3g1581 3 21539365 21541905 PCT
Lal13g0710 13 4612978 4615488 Lal18g0229 18 1907078 1909693 PCT