Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0703 ATGGATCGTGTCTTCTCAGTCGGCGAAATCGCCGACCACTTCTGGTCGCCGGCGATTCCCACAACCCTCTCATCCGGCGGCGCCGACGAATCTTCCAAGATGAATCGCAGCGCTTCCGAATGGGCCTTCCAGCGCTTTCTTCAAGAAGCCACATCAGCAACATCTCCACCTTCTTCTTCATCCGTTGCTGATCGAAACGACGACGTCGTTCTCGTTGAGACCAATAGCCACCAATCCAAACTGGATCACGCACAGAGCGTGGACACCACGCCCCTTCAGAAAAACGCTGCCGTTTTGCACAATGGGCCTTCTGTTCTTCCTCCTGGGCCCGTTGGTTCAGAGGAGTACCAGGCTTTCCTTAAGAGCAAGCTCAATCTCGCATGCGCTGCCGTCGCCATTGCCAGGGGGTCTTTGATCAAATCTCAAGATCAAGCCACTTTTCCTGACAGTGGACCACAACCACTGTCTAATCTTTCTCAACCTGGACCTCAGCCTAATTTTACAGGTTCTGGTCCTTCTGGAAGTGACCCACCTAAATTGCAAGAGAAAGATGCCAAAGCACCAGTTGGGATTCCTTCCATACCTGCCATGCAAAAGAAACCTGCTGTTGCCATCAGGCCATCAACAAGTGGATCATCAAGAGAACTGTCAGATGATGAGGACATGGATGGAGAGACAGATATCAATGATAACATGGACCCTGCTGATGTAAAACGAGTAAGAAGGATGCTTTCTAATAGGGAGTCAGCGAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTATCTGATCTGGAGACACAGGTGAATCAATTAAGAGGTGAAAACTCTTCCTTGTTAAAGCGCCTTACTGATGTAAGCCATAAGTACAATGAATCTGCTGTTGACAACAGAGTATTGAAAGCTGATGTTGAAACATTAAGAGCTAAGGTGAAGATGGCTGAAGAGACTGTAAAAAGAATTACTGGGTTGAACCCAATGTTTCATGCCATGTCTGATATATCAACCATGAACATGCCTTCATTTGATGGAAGTCCTTCTGACACATCAGCTGATGCAGCTGTTCCTGTGCATGATAATAACCCAAATCATCACTTTTATCAACAACCCATATCTAATAATCCTATACCCGGTCATGACATGAGAGTCATCAATAATGGGTTGGGGGACATTCCTTCTTCAATCGAAAATGTGCCGCAGAATGCGTCTGCAGCAGTGACCGGAGGGAATAAGATTGGTCAACCAGCTTCCTTGCACCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTTGATTCTACTGGACCATCTTCCAATGGAGAGCATTAG 1338 0.4738 MDRVFSVGEIADHFWSPAIPTTLSSGGADESSKMNRSASEWAFQRFLQEATSATSPPSSSSVADRNDDVVLVETNSHQSKLDHAQSVDTTPLQKNAAVLHNGPSVLPPGPVGSEEYQAFLKSKLNLACAAVAIARGSLIKSQDQATFPDSGPQPLSNLSQPGPQPNFTGSGPSGSDPPKLQEKDAKAPVGIPSIPAMQKKPAVAIRPSTSGSSRELSDDEDMDGETDINDNMDPADVKRVRRMLSNRESARRSRRRKQAHLSDLETQVNQLRGENSSLLKRLTDVSHKYNESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFHAMSDISTMNMPSFDGSPSDTSADAAVPVHDNNPNHHFYQQPISNNPIPGHDMRVINNGLGDIPSSIENVPQNASAAVTGGNKIGQPASLHRVASLEHLQKRIRGGVDSTGPSSNGEH 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0703 445 Pfam Basic leucine-zipper C terminal 305 434 IPR020983 -
Lal13g0703 445 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Lal13g0703 445 PANTHER BZIP TRANSCRIPTION FACTOR 1 426 - -
Lal13g0703 445 MobiDBLite consensus disorder prediction 143 238 - -
Lal13g0703 445 PANTHER BASIC LEUCINE ZIPPER 63 1 426 - -
Lal13g0703 445 Pfam bZIP transcription factor 237 289 IPR004827 GO:0003700|GO:0006355
Lal13g0703 445 Gene3D - 237 293 - -
Lal13g0703 445 SUPERFAMILY Leucine zipper domain 238 288 IPR046347 GO:0003700|GO:0006355
Lal13g0703 445 CDD bZIP_plant_GBF1 239 290 IPR045314 GO:0003700|GO:0006355
Lal13g0703 445 SMART brlzneu 234 298 IPR004827 GO:0003700|GO:0006355
Lal13g0703 445 MobiDBLite consensus disorder prediction 143 175 - -
Lal13g0703 445 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 291 IPR004827 GO:0003700|GO:0006355
Lal13g0703 445 Coils Coil 296 316 - -
Lal13g0703 445 Coils Coil 247 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0703 Lal-Chr13 4567053 4572623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0703 1 327 bZIP Transcription Factor Family AT4G02640 41.964 1.11e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal13g0703 bZIP_C 5.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0703 K25784 - gmx:100170702 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0703 13 4567053 4572623 Lal13g0703 13 4567053 4572623 ECH
Lal12g0624 12 4517973 4522990 Lal13g0703 13 4567053 4572623 LSH