Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0697 ATGTCTCACTTATGGCACAACAAAACCCAAAGTAAAATCAAGCTTCAGTTGTTTTCACCTTTCTCGTTAAATCAAATGATTCATACATTTCTCATTGCAAGATTAAGTGCATCATCATTCACTCAGCGCAGTCGCACCCAAATCCAATTGGGTTCTCTGCTGCCATACAATGCTTTTATTTTCTTTAAGCCATTCACCTCAGGAACTTCTTCTAAATCTGAATCACAAACAAATCACCACAAATTTTACACCTTTACTGTTTCTTACCTCACCAACTCATGTGGGTTGGCTCCTGATTTGGCTCTCAAAATCTCCAAAAAGATTAAATTGAAAAACCAAGGTGGGCCAAATATTGTTCTTGATCTTCTCAAGAATTATGGGTTCTCCCAAAAGCAGTTATCTATCTTGATCAGAAGATTACCTTCAGTGCTTTTAGCTGAACCTGATAAGACCCTTCACCCAAAACTCAAGTTCTTACAATCTATTGGGATGTCAAAAATTGATCTTCCCAAAATCATCATTGGAAACTGTTCATTATTAACGCTAGACTTGAAGAACAACATTATCCCTCGGTATAACATCATCAGGAGTTTCCTTCGCAGTGATGAGGAAGTAGTTTCAACTTTGAAGCATGGGCCAAGGTACTTTCATGGTTATGAGGTAGTAAATGATTCAGTTCAGAACATAGAGGTTTTGAGACGCCTTGGCTTGCCTCAAGGTTCAATCTCTCTATTAGTAACCAATTTCCCTAGTGTAGTGTTTCTGAAGCATTCAAAATTCAACGAGGCTGCCGAGAAAACGAAAGAAATGGGGTTTGATCCCATGAAAACAAATTTTGTTTTGGCACTTCAAGTACTTGCGAAGATGGATAAGGCAATGTGGAAAGCGAAATTAGAGGCTCTCCAAAGGTGGGGTTGGTCCAGAGATATTTGTCTTTTGGCTTTCAAAAAGTATCCCCAGTATATGTTGATTGCAGAAAAGAAGATTATGAAAATACTGAGCTTCTTGGTAGAGGATATGGGTTGTTCCTTAGAAGACATTACTAGATGCCCGGGGATTTTGAACCGCAACATGGAGAAGACATTTATCCCTAGATGTGCAGTTGTTAAAGTTTTGAAGTCAAGGGGTTTGGTAAAGAATGATTTGCAAATAAGTACCTTTATGATACTTACTGAGAAAAAGTTTTTGGAGAAATATGTGACCCGATTTCAGAACAACGTGCCTCTACTATTGGATGTGTATGAAGGTAAAAAAGTTGGATTGATCATTTGA 1272 0.3805 MSHLWHNKTQSKIKLQLFSPFSLNQMIHTFLIARLSASSFTQRSRTQIQLGSLLPYNAFIFFKPFTSGTSSKSESQTNHHKFYTFTVSYLTNSCGLAPDLALKISKKIKLKNQGGPNIVLDLLKNYGFSQKQLSILIRRLPSVLLAEPDKTLHPKLKFLQSIGMSKIDLPKIIIGNCSLLTLDLKNNIIPRYNIIRSFLRSDEEVVSTLKHGPRYFHGYEVVNDSVQNIEVLRRLGLPQGSISLLVTNFPSVVFLKHSKFNEAAEKTKEMGFDPMKTNFVLALQVLAKMDKAMWKAKLEALQRWGWSRDICLLAFKKYPQYMLIAEKKIMKILSFLVEDMGCSLEDITRCPGILNRNMEKTFIPRCAVVKVLKSRGLVKNDLQISTFMILTEKKFLEKYVTRFQNNVPLLLDVYEGKKVGLII 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0697 423 Pfam mTERF 289 396 IPR003690 GO:0003690|GO:0006355
Lal13g0697 423 Pfam mTERF 120 330 IPR003690 GO:0003690|GO:0006355
Lal13g0697 423 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 63 417 - -
Lal13g0697 423 Gene3D Transcription termination factor 3, mitochondrial 201 406 IPR038538 -
Lal13g0697 423 PANTHER CGI-12 PROTEIN-RELATED 63 417 IPR003690 GO:0003690|GO:0006355
Lal13g0697 423 SMART mt_12 312 343 IPR003690 GO:0003690|GO:0006355
Lal13g0697 423 SMART mt_12 170 201 IPR003690 GO:0003690|GO:0006355
Lal13g0697 423 SMART mt_12 344 378 IPR003690 GO:0003690|GO:0006355
Lal13g0697 423 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Lal13g0697 423 SMART mt_12 243 273 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0697 Lal-Chr13 4533358 4534901 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal13g0697 mTERF 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0697 K15032 - gmx:106799612 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0697 13 4533358 4534901 Lal13g0697 13 4533358 4534901 ECH