Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0694 ATGTTTGATGGAGTACCAGACCAGTTCCATCAATTCATAACACAAAGGACTTCACTTCCTCTTCACTTACCTTTCCCTCTTCATTCTTCTGCTGTACCAAGCAATAGCACCTTCCATTCTTTTGATCCTTATAACCCATTACCTCATCAATTGCCACTTCAACTCCAACCCAATCTCTTGCACCAATTACATCACCAACACCAACCTTCTACCCACAAAGAACATGAAGCTGAGAAGGAAGAACATGGTACTGTGCCTATGAACTTTGAAATTGATCAAAGAGATCAAAGTATTGATCCTTGGACTAATGATGAAGTGCTTGCACTTTTGAGGATCAGATCTAGCATGGAGAGTTGGTTCCCAGAGCTCACTTGGGAACATGTCTCAAGGAAGCTAGCAGAGCTTGGATATAAGAGGAGTGCAGAGAAATGCAAGGAGAAGTTTGAAGAGGAAAGCAGATATTTCAACAACATTAACTACACCAATAATAATAATAATAATAACAATAATTATAGGTTTCATAGTGAGCTTGAAGAGCTTTATAATCAAGGTGATAATCGTCGAGTTGGTGGGAGTGAAAAGCCAACAAGCACAGAAGAAGGACAAGACAAGATCATGGACCTAGAAGAGGGTTCAGCAACACAAAAGGTGCAAGGTCATGATGAAGAAGGGGTGGTTGTGGAAAACCCAAAGGAGGACATGAGGCCTAAGAGGAAGAAGCCAGATAGGTTTGAAATGTTTAAGGGTTTTTGTGAGAGCATTGTGCACAAGATGATGGAGCAACAAGAAGAGATGCACAACAAATTGATTAAGGATATGTTGAAGAGAGATGAAGAGAAGTTAGCAAAGGAAGAAGCTTGGAAGAAGCAAGAGATGGATAGAATGAACCAAGAGCTTGAGATTATGGCACAGGAACAAGCAATTGCTTGTGATAGACAAGCCAATATGATTGAATTCTTGAACAAGTTCTCAAAAACTACTTCTTCCCCTATTTCAAGCCAAATCAAGGTAACAAATGTTTCAAACCCAAACACTTGCACTACTCCTTCTTCACCACCATCACAAAACCCTAATCCTTCTAATATGGTCCTAAATAATCGTGTAAATAACGCTTCTTCAGAAGCAGAAAACCCTAGCTCTATTCCTACCCAAGAAACATTACAAAATGCTTCTTCTACTACTTCACCTCCAATTATCCAGAACCCTACTTCTCCTTCTCTAAATAGGCAGAATAATACAAATTCAGTTTCAAATAAAGCCTCCCCAAATGTTAATGTTGAGAAAGATGGTGTTGGGAGAAGATGGCCAAAAGATGAAGTTTTGGCACTGATAAATCTCAGGTGCAGTAGCTTAAACAATAACAGCAATGAAGAGATGGAAGGAAACAAGGCTCCTTTGTGGGAGAGAATCTCACAAGGAATGTTGGAGTTGGGATATAAGAGAAGTTCAAGGAGATGCAAAGAGAAATGGGAGAACATAAACAAATACTTTAGAAAAACAAAAGATGATAATAAGAAGAGGTCGCTTGATTCCAGAACTTGTCCTTATTTCCACCAATTGAGCAATCTGTATAATCAAGGAAAGCTTGTTCTACAATCTGAAAGGCTAGAAAATAAGTTGAGTCCACAAGAAAATACTGTGGGGGTGAGTACACCAGATCAAAATCAAAGCAAATTAGCTGAGTCTTGTTCTCAGGTGGGGTCTGGTGGTTTCAGTGTTGATCATCATGAAGGTGAGAAAACTTTGATGCACGTACCTTCTTTGGATTTTGATCAGTTTTAA 1782 0.3917 MFDGVPDQFHQFITQRTSLPLHLPFPLHSSAVPSNSTFHSFDPYNPLPHQLPLQLQPNLLHQLHHQHQPSTHKEHEAEKEEHGTVPMNFEIDQRDQSIDPWTNDEVLALLRIRSSMESWFPELTWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNINYTNNNNNNNNNYRFHSELEELYNQGDNRRVGGSEKPTSTEEGQDKIMDLEEGSATQKVQGHDEEGVVVENPKEDMRPKRKKPDRFEMFKGFCESIVHKMMEQQEEMHNKLIKDMLKRDEEKLAKEEAWKKQEMDRMNQELEIMAQEQAIACDRQANMIEFLNKFSKTTSSPISSQIKVTNVSNPNTCTTPSSPPSQNPNPSNMVLNNRVNNASSEAENPSSIPTQETLQNASSTTSPPIIQNPTSPSLNRQNNTNSVSNKASPNVNVEKDGVGRRWPKDEVLALINLRCSSLNNNSNEEMEGNKAPLWERISQGMLELGYKRSSRRCKEKWENINKYFRKTKDDNKKRSLDSRTCPYFHQLSNLYNQGKLVLQSERLENKLSPQENTVGVSTPDQNQSKLAESCSQVGSGGFSVDHHEGEKTLMHVPSLDFDQF 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0694 593 MobiDBLite consensus disorder prediction 327 349 - -
Lal13g0694 593 Gene3D - 101 157 - -
Lal13g0694 593 Gene3D - 435 499 - -
Lal13g0694 593 MobiDBLite consensus disorder prediction 184 204 - -
Lal13g0694 593 ProSiteProfiles Myb-like domain profile. 93 152 IPR001005 -
Lal13g0694 593 MobiDBLite consensus disorder prediction 357 424 - -
Lal13g0694 593 Pfam Myb/SANT-like DNA-binding domain 99 179 IPR044822 -
Lal13g0694 593 Pfam Myb/SANT-like DNA-binding domain 433 522 IPR044822 -
Lal13g0694 593 MobiDBLite consensus disorder prediction 541 560 - -
Lal13g0694 593 ProSiteProfiles Myb-like domain profile. 434 494 IPR001005 -
Lal13g0694 593 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 13 586 - -
Lal13g0694 593 CDD GT1 433 501 - -
Lal13g0694 593 PANTHER - 13 586 - -
Lal13g0694 593 MobiDBLite consensus disorder prediction 327 431 - -
Lal13g0694 593 SMART sant 431 496 IPR001005 -
Lal13g0694 593 SMART sant 97 154 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0694 Lal-Chr13 4510294 4512958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0694 1 553 Trihelix Transcription Factor Family AT5G28300 38.401 1.08e-99 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal13g0694 Myb_DNA-bind_4 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0694 - - gmx:100804367 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0694 13 4510294 4512958 Lal13g0694 13 4510294 4512958 ECH
Lal12g0620 12 4500314 4502870 Lal13g0694 13 4510294 4512958 LSH
Lal13g0694 13 4510294 4512958 Lal24g0537 24 3787595 3790026 LSH