Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0684 ATGGCTGCTCCTCCCTGCCTAATATTCACTGTTAGGAGACACCAACCAGAATATGTAACTCCTGCTAAGCCAACTCCTCATGAAATTAAGCCACTTTCTGATATAGATGACCAACAAGGTTTGCGTATCCAAATTCCATTCATACAAATCTACCGTAATGAACCTTCAATGGAAGGAAAAGACCCAGTTCAAGTCATTAGACAAGCACTTGCACAAACACTTGTCTTCTACTATCCATTTGCAGGTAGGCTTAGGGAAGGTGCTGACAGAAAACTCATGGTGGATTGTAATGAAGAGGGTGTGTTGTTCATTGAGGCTGATGCAGATGTAACACTTGAGCAATTTGGTGATGCTCTTCAACCTCCTCTTCCATGTTTTGAAGAACTCCTTTATGATGTTCCTGGCTCAGAAGGAATTCTTTACACCCCACTTCTGCTGATACAGGTTACACGCCTCAAGTGTGGCGGTTTCATTGTTGGCTTGCGATTTAATCACACAATGGTTGATGGAGCTGGCATTCTTCAATTCATGACAGCCTTATCAGAAATGGCTCGAGAGGAAGTTCCTAGTACTACTGATTCCATCATAGTTCCATCATCCAATAATGATGACGATAACTTAGTTCACAAATCTTTCTTTTTTGGACCCAATGAGATAGCAGCAATTCATGCCTTGCTTCCCATTCATTTTGATCGATGCACCACTTTTGAAGTTCTTACAGCATATATATGGCGTTGTAGAACAAAAGCACTGCAATTGGAATCACATGAGGTTGTTCGAATGATGTGTATCGTAAACGCACGTTATAAGTTTAACCCTCCAATACCTTCTGGTTATTATGGAAATTGTTTTGCATACCCTGTAGCAATCACTGAAGTAGGTAAACTCAGTGAAAACCCATTTGAGTATGCAGTGGAATTGATTAAAAAAACAAAGGCTGAGGTAACTGAAGAATATATGCATTCTTTGGCAGATTTTATGGTGATTAAGAAACGACCTTTATTTACAATAGCAGGAACTAGCATTGTATCAGATGTAACACGTCTTTTGTATAGAGATGTGGATTATGGATGGGGTAAGTCTTTATATGGTGGACAAGCTAAAGCTGGAGCAGGTTCATTTTTTGGAGCAAACTATCATGTTTGGAGTAGAAATTCAAGAGGGGAAGATGGTGTGGTATTACTAATTTGCTTGCCTGCTAAAGTTATGAAAAGATTTGCAAAAGAATTGGTTGATGGCTTGTTTCATAGGCAAAACAAAAATACTTGA 1269 0.3932 MAAPPCLIFTVRRHQPEYVTPAKPTPHEIKPLSDIDDQQGLRIQIPFIQIYRNEPSMEGKDPVQVIRQALAQTLVFYYPFAGRLREGADRKLMVDCNEEGVLFIEADADVTLEQFGDALQPPLPCFEELLYDVPGSEGILYTPLLLIQVTRLKCGGFIVGLRFNHTMVDGAGILQFMTALSEMAREEVPSTTDSIIVPSSNNDDDNLVHKSFFFGPNEIAAIHALLPIHFDRCTTFEVLTAYIWRCRTKALQLESHEVVRMMCIVNARYKFNPPIPSGYYGNCFAYPVAITEVGKLSENPFEYAVELIKKTKAEVTEEYMHSLADFMVIKKRPLFTIAGTSIVSDVTRLLYRDVDYGWGKSLYGGQAKAGAGSFFGANYHVWSRNSRGEDGVVLLICLPAKVMKRFAKELVDGLFHRQNKNT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0684 422 PANTHER ALCOHOL ACYLTRANSFERASE 202 413 - -
Lal13g0684 422 PANTHER ALCOHOL ACYLTRANSFERASE 9 186 - -
Lal13g0684 422 Gene3D - 209 415 IPR023213 -
Lal13g0684 422 Gene3D - 10 208 IPR023213 -
Lal13g0684 422 Pfam Transferase family 231 409 - -
Lal13g0684 422 Pfam Transferase family 14 193 - -
Lal13g0684 422 SUPERFAMILY CoA-dependent acyltransferases 232 330 - -
Lal13g0684 422 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 202 413 - -
Lal13g0684 422 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0684 Lal-Chr13 4432903 4435380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0684 42 412 Monolignol Biosynthesis Gene Families AT5G48930 26.716 2.05e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0684 K19861 - gmx:100797017 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0684 13 4432903 4435380 Lal13g0684 13 4432903 4435380 ECH