Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0680 ATGCTCACTTCTACAGAAGAAAAGCCTTCAGAAAATGCAAGTGAGGTTTTGAAATCATCATTGGAATCTAGCCCAGATTCCATTGATGGATACCGACCAGTTTCAACCGTTTACACTGATGTGGGTGTGGTGCCAGAGCAAGAAAAGAAGGAGCTTGAGCATTTGGTATCAAACTTAGAAAGAGAAATGGATCAGCTAAGGCTGAAGCAAAAGATGTTGGATGAGAAACGTAGAGAAGCATTGAATAAGATATTTGACATCAAAGGCAGCATCAGAGTATTTTGTAGAATTCGACCAATTGTGTTAGCTGATAAGAGAAGAATTTCTGAACCTGTTTCAGCTGGATCAGAGACAGTTCGGGTTAAGTTCGGAGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTTACTCAAGAAGTGAGCCAAGAAAGTGTTTTTGTTGAGATCGAGCCAATTCTCAGATCCGCAATAGATGGGCACAATGTTTGTGTTTTTGCTTATGGTCAAACTGGCACTGGCAAGACATTCACAATGGATGGAACGAACGAGCATCCTGGAATTATTCCACGTGCACTTGAACAACTCTTTCGTCAAGCCTCTTTGCATTGTTCATCTTCTTTTACATTTTCGATGAGCATGTTGGAGGTTTACATGGGCAATATCAGGGATCTCTTGGCTCCAAGACCAAATGGTAGAGCATATGAACCTATCACAAAATGCAATCTCAACATCCAAACAGATCCTAAAGGATTGATTGAAATTGAAGGACTCACAGAAGTGCAAATTTCAGATTATGCTAAAGCCAAATGGTGGTACAACAAAGGTAAACGGTTCAGATCAACATCATGGACTAATGTCAATGAGGCATCAAGCAGATCACACTGCTTGACGAGGATAAACATTTTTCAACGTGGGGATGCTATGGAAAGGAAAAGCCAATTGAGTAGATTGTGGATGGTTGATCTTGGAGGCAGTGAACGGTTGCTTAAAACTGGAGCCAAAGGACTAACACTCGATGAAGGCCGAGCCATTAATCTTTCTCTTTCGGCTTTAGCAGATGTCATTGCAGCTTTGAAGAGGAAAAGGTGTCATGTGCCTTACAGGCAAATAGTTCATGATTTGCCACACATTTCTTCAATCTTTATGATAAAGTCAGATACTTCAGGTGATGGATCAAGGGTCTTGATGCTGGTGCATATAAGACCTTCCGAAGAAGATGTTTGTGAGACAATTTGTTCTTTGAACTTTGCAAAAAGGGCGAGAGCAATAGAGTCGAGTAAAGAAATAACAATGGATTTGAAGAAGCAAAAGGAAAATAAGATTATGAAGCTTGAAGAAGACATTAAGGAAGCCGATAAACAACTTCAGAATATAAGGGACCAAATACAGAATGTTGAGTTCAAGTTAAGTGAGAGTAAAAATGATGAAATTGAGGCCTCTATTAGTCCCAAAGATGATGTCAATGAGATCATTGAAACTCCTAAAGCATCTAAGAAGTCTATTAGAAGAAATGTCTCCAATTCATCAGTGCCTCGATTCATGAATCCGACCGTTGCTAGTCGCCAAAGGCAGAGTACTGCAGGTCATGACAGTATTGGTGGGAGATCAAAAGGTTTAAGATCAGTTGTCGCCTTAAGTTCAATGCAGCTTTCATGTTCTCAATCATTAAGTTATTCAGATATCCGCATTAAAGGGTTGCTGCGAAGTTCAAATGGAAAATCTAGACATGCTGAAACAAATACTGTTCTTGCTGAGACGCCTAAATGCATTGAATTGGAATCAAAAACCATAAATCCTCCAAGCAAGATGGTTACGTCATCGGATCCAAATTTGAGAGTTAAATTGTGTCATCATAGAAGAAGGATGTCTAATCTGATCTAA 1881 0.395 MLTSTEEKPSENASEVLKSSLESSPDSIDGYRPVSTVYTDVGVVPEQEKKELEHLVSNLEREMDQLRLKQKMLDEKRREALNKIFDIKGSIRVFCRIRPIVLADKRRISEPVSAGSETVRVKFGGTRKDFEFDKVFTQEVSQESVFVEIEPILRSAIDGHNVCVFAYGQTGTGKTFTMDGTNEHPGIIPRALEQLFRQASLHCSSSFTFSMSMLEVYMGNIRDLLAPRPNGRAYEPITKCNLNIQTDPKGLIEIEGLTEVQISDYAKAKWWYNKGKRFRSTSWTNVNEASSRSHCLTRINIFQRGDAMERKSQLSRLWMVDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVIAALKRKRCHVPYRQIVHDLPHISSIFMIKSDTSGDGSRVLMLVHIRPSEEDVCETICSLNFAKRARAIESSKEITMDLKKQKENKIMKLEEDIKEADKQLQNIRDQIQNVEFKLSESKNDEIEASISPKDDVNEIIETPKASKKSIRRNVSNSSVPRFMNPTVASRQRQSTAGHDSIGGRSKGLRSVVALSSMQLSCSQSLSYSDIRIKGLLRSSNGKSRHAETNTVLAETPKCIELESKTINPPSKMVTSSDPNLRVKLCHHRRRMSNLI 626
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0680 626 MobiDBLite consensus disorder prediction 1 30 - -
Lal13g0680 626 PANTHER KINESIN-LIKE PROTEIN KLP-3 11 621 - -
Lal13g0680 626 Pfam Kinesin motor domain 118 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0680 626 PRINTS Kinesin heavy chain signature 159 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0680 626 PRINTS Kinesin heavy chain signature 284 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0680 626 PRINTS Kinesin heavy chain signature 316 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0680 626 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 11 621 - -
Lal13g0680 626 Gene3D Kinesin motor domain 85 469 IPR036961 -
Lal13g0680 626 Coils Coil 427 475 - -
Lal13g0680 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 463 IPR027417 -
Lal13g0680 626 ProSiteProfiles Kinesin motor domain profile. 90 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0680 626 Coils Coil 49 83 - -
Lal13g0680 626 MobiDBLite consensus disorder prediction 500 531 - -
Lal13g0680 626 SMART kinesin_4 88 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal13g0680 626 MobiDBLite consensus disorder prediction 1 32 - -
Lal13g0680 626 MobiDBLite consensus disorder prediction 496 535 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal13g0680 Lal-Chr13 4402068 4406866 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0680 11 430 Calmodulin-binding Proteins AT5G65930 34.312 1.05e-63 226
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0680 - - gmx:100785581 894.804
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0680 13 4402068 4406866 Lal13g0680 13 4402068 4406866 ECH
Lal13g0680 13 4402068 4406866 Lal24g0807 24 6394550 6396654 LSH