Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0678 ATGGCTTTTGGTTTAATCTCTGCAGTTTCAAAATTGCAAATGGTATCCACTTCAGATCATGCATCTGTAGTCTCAATGAACCTATTTGTTGCACTTCTGTGTGCTTGTATTGTCATTGGTCATCTTCTTGAGGAGAATCGTTGGATGAATGAGTCTATCACTGCCCTTTTAATTGGTCTTTGCACTGGTGTAGTCATTTTGCTGTTTAGTGGTGGTACAAGCTCTCGCGTTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTTCCACCTATAATATTTAATGCTGGGTTTCAAGTGAAAAAGAAACAGTTTTTTGTCAACTTTATGACCATCATGTTGTTTGGTGCTATTGGTACATTAATATCTTGTACCATCATAACTTTGGGTGTTTCACAAATTTTTAAGAGGATGAATATCGGTCCACTGGAAATAGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCAACCGATTCTGTGTGCACATTGCAGGTGCTAAATCAGGATGAAACACCTTTACTGTACAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAGAGCTTTGACCTCGATCAAATTGACACGTCAATTGCCTCACAATTTATTACCAACTTCTTGTATCTGTTCGTCACAAGCACATTGCTTGGGGTTTTGTCAGGTCTTCTCAGTGCCTACATCATTAAGAAGTTGTATATTGGCAGGCACTCTACAGATCGAGAGGTTGCTCTTATGATGCTAATGGCATACCTCTCCTACATGCTGGCCGAGTTATGCTATCTGAGTGGCATTTTAACTGTATTCTTTTGTGGGATCGTTATGTCTCATTATACTTGGCACAATGTGACAGAGAGCTCAAGAATCACCACAAAGCATGCTTTTGCAACCTTGTCGTTTGTTGCTGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCTATGGACATTGAAAAATGGAGGTTTGTCAGTGATAGCCCTGGAACATCCGTAGCAGCAAGTTCAATACTGTTGGGTCTAGTACTTGTTGGAAGAGCAGCTTTTGTTTTCCCATTATCCTTCCTATCCAACTTATTTAAGAAGTCACAAAGTGAAAAGCTCTCCTTCAGACAGCAGGTTATCATCTGGTGGGCTGGTCTTATGCGAGGTGCTGTTTCCATGGCACTTGCTTATAATCAGTTCACCATGTTGGGTTATACACAACTGCGAACCAATGCAATAATGATCACTAGCACAATCACTGTTGTGCTTGTCAGCACTGTGGTGTTTGGTTTGATGACTAAGCCACTGATAAGGCTTTTGCTGCCTCATGGCCCTCCAAAAGGCACAAGCAGCATGATAAGCACAGATCCGTCCACTCCAAAATCATTCACTATCCCACTTCTAGGAAGTGCTCAAGAATCTGAAGCTGATATCGGTGGCCATGAAATTCATCGTCCAAGCAGCATCCGTGCATTACTAGCCACTCCAACACACACCGTTCACCGATTATGGCGCAAGTTTGATAATGCATTCATGCGTCCTGTTTTCGGTGGCAGAGGTTTTGTTCCTGTGGAGCCTGGCTCACCATCTGAGCGCAATGGTCATCAATGGCGTTGA 1632 0.4203 MAFGLISAVSKLQMVSTSDHASVVSMNLFVALLCACIVIGHLLEENRWMNESITALLIGLCTGVVILLFSGGTSSRVLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLISCTIITLGVSQIFKRMNIGPLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLDQIDTSIASQFITNFLYLFVTSTLLGVLSGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAEIFIFLYVGMDAMDIEKWRFVSDSPGTSVAASSILLGLVLVGRAAFVFPLSFLSNLFKKSQSEKLSFRQQVIIWWAGLMRGAVSMALAYNQFTMLGYTQLRTNAIMITSTITVVLVSTVVFGLMTKPLIRLLLPHGPPKGTSSMISTDPSTPKSFTIPLLGSAQESEADIGGHEIHRPSSIRALLATPTHTVHRLWRKFDNAFMRPVFGGRGFVPVEPGSPSERNGHQWR 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0678 543 PANTHER SODIUM/HYDROGEN EXCHANGER 7 542 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal13g0678 543 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0678 543 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0678 543 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0678 543 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0678 543 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 25 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal13g0678 543 Gene3D - 146 197 - -
Lal13g0678 543 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal13g0678 543 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0678 Lal-Chr13 4381589 4387303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0678 7 541 Antiporters AT3G05030 76.723 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0678 - - gmx:100816746 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0678 13 4381589 4387303 Lal13g0678 13 4381589 4387303 ECH
Lal13g0678 13 4381589 4387303 Lal24g0528 24 3698952 3704950 LSH
Lal18g0333 18 2807904 2814524 Lal13g0678 13 4381589 4387303 PCT
Lal13g0678 13 4381589 4387303 Lal18g0333 18 2807904 2814524 PCT