Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0660 ATGGAAGTCGATACTACTATAAAGAACAATACTTACACACAGAAACACTCGCATTCAGAAAACCATAACCATCACTATAGTCATTTCCCCTCCAAAACCATTGTCATAACAATCACAGTAGTTGCCACAGTTACAATCCTATTTACCATTTTTATGGTCATATTCTTGCTCCGTCGGCAAAAAACTTCTACCAAGAATGAAACTTGCAAAGATAAGAGTAGAGTGCTTCATGACACAAGCAGCAGGTTCATTGCTTCAACAACCTTGACCTTCACTTCTAGCCCAGATGTGAAAAGAGGGTGTCTTCATGGTGGAAATATAAACAGGACACCAGTACCTAAATTTAGGGGGGTCCAAGTTTTCACATATAAGGAACTAGAAGTGGCCACAGATGGATTTAGTGAAGCAAAAGTGATTGGTAATGGAGGGTTTGGTTTGATGTATAGAGGGGTCCTTAGTGATGGAACTTTGGCAGCAATTAAGTTGTTGAACAGAGAAGGTAAACAAGGTGAACGTGCCTTCAGAACAGAGGTTGATCTCTTAAGCCATTTACACTCTCCTTATTTGGTGGAACTACTTGGCTATTGTGCTGACCATAACCACAGGCTATTGATATTTGAATACATGCCCAATGGCACACTCCATCACTATATTCACTCCTCCAACAATCAAACACAACCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCATTGGAGCTTCTGCATGAACATGCTGTTTCACCTGTGATCCACCGAGACTTCAAGAGTAACAACGTTCTACTGGACCATAATTTCCGTGCAAAGGTGTCAGATTTTGGATTGGTAAAGATGGGATCAGAGAAAAAGAACGGCCACGTTTCCACCCGTGTGTTAGGGACCACTGGATATTTGGCACCAGAGTAA 921 0.4245 MEVDTTIKNNTYTQKHSHSENHNHHYSHFPSKTIVITITVVATVTILFTIFMVIFLLRRQKTSTKNETCKDKSRVLHDTSSRFIASTTLTFTSSPDVKRGCLHGGNINRTPVPKFRGVQVFTYKELEVATDGFSEAKVIGNGGFGLMYRGVLSDGTLAAIKLLNREGKQGERAFRTEVDLLSHLHSPYLVELLGYCADHNHRLLIFEYMPNGTLHHYIHSSNNQTQPLDWWARMRIALDCARALELLHEHAVSPVIHRDFKSNNVLLDHNFRAKVSDFGLVKMGSEKKNGHVSTRVLGTTGYLAPE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0660 306 Gene3D Transferase(Phosphotransferase) domain 1 209 306 - -
Lal13g0660 306 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 8 306 - -
Lal13g0660 306 MobiDBLite consensus disorder prediction 1 25 - -
Lal13g0660 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lal13g0660 306 Pfam Protein kinase domain 134 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0660 306 ProSiteProfiles Protein kinase domain profile. 133 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g0660 306 SUPERFAMILY Protein kinase-like (PK-like) 114 306 IPR011009 -
Lal13g0660 306 Gene3D Phosphorylase Kinase; domain 1 106 208 - -
Lal13g0660 306 PANTHER OS01G0750732 PROTEIN 8 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0660 Lal-Chr13 4263952 4268082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0660 80 306 Receptor kinase-like Gene Family AT3G58690 53.586 5.86e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lal13g0660 Pkinase 2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0660 - - ahf:112710869 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0660 13 4263952 4268082 Lal13g0660 13 4263952 4268082 ECH
Lal12g0601 12 4318609 4321991 Lal13g0660 13 4263952 4268082 LSH