Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0648 ATGATGGAAGCTCTTTACAATGAGTCGGTTCAGGATTTTGTTACTCTTCCTCCCTTTCCGCATTCTCATCCCCTCTACCTTTTTTATTCTTTAAAATCTGGGACATTACTGGATATGAAGCCACAGCTGTCAGTTCAGCAACCTGCATATCTATCTCTGCCAGAGGGAACAGCTTCTGTTGTTGGCGTCATAGCAATGATGACAGATCACTACAATGTGCTGGGGGGTGTTAGCCGTTGTGTTGCTCAAGCAAAGGTTGCTAAAATTGATGACCACTGTGTACAACAAACACCTTTTGGAAACTTTTTTACTTTCGGTTTTGATGTACCTTTTTCATTGAGATCCTTTCTTAAGGCTAAGGAAACATTGCTAATGGAACTCAAAAGTGCAAACGCTGACATATTGGAAAACCAAAATGTCATCGAATGCTTAAAAGATTCCGAGTCTTTCAAGAAGCATTACGCCGCGGTTTCTGATGCTATGGTTCATTTGAGGCAACACAATACTTACACTGGAAATTATCTGCCGCCAGGGATGAAGCCCCAATCGAATTTCAATGATCATAATAACCTTCCCAGTTTGTTGGATAGTTCTCTACCACAAGAGTTCGGGTCATCTGTCAAAGAAATTACTAAAGGATCCAGGCAAAGGGCAAATGCTATGGTGGATGCTGCATTTCAGGCATTGTCTTCGATAAAGGATGAAGATGCTTTCACAAGGACAGGGCAGGCATTGGATTCTATTGATTATCAGCAGTTGATCTCCAACACTAGGTTACCTATGATCAGGTCTCAAGAACAAGTGAATGGCAGTTCTTATCATCATAATCAGTCAACAATTTGTGCCTCGGTTTCCCCAGGTCCAAAAATGCATAATGATTCTAACGAAGTTCACGCCAAAATTCCTTTGGAGCTCATTACTCCATGTATTGTTACATTAATCATGACACAGACTTGCACTGAACGGCAATACCCTCCTGCTGATGTGGTTCAGATGTTAGATTCTGCTGTTACCAGTCTGCATCCATGCTCTCCTCAAAACCTTCCTATTTTCAGAGAGATTCAAATGTGCATGGGAAGAATTAAGACTCAGGTCAATAAGGTTCAAATGATGGTATTTATAATTATGTAA 1131 0.4085 MMEALYNESVQDFVTLPPFPHSHPLYLFYSLKSGTLLDMKPQLSVQQPAYLSLPEGTASVVGVIAMMTDHYNVLGGVSRCVAQAKVAKIDDHCVQQTPFGNFFTFGFDVPFSLRSFLKAKETLLMELKSANADILENQNVIECLKDSESFKKHYAAVSDAMVHLRQHNTYTGNYLPPGMKPQSNFNDHNNLPSLLDSSLPQEFGSSVKEITKGSRQRANAMVDAAFQALSSIKDEDAFTRTGQALDSIDYQQLISNTRLPMIRSQEQVNGSSYHHNQSTICASVSPGPKMHNDSNEVHAKIPLELITPCIVTLIMTQTCTERQYPPADVVQMLDSAVTSLHPCSPQNLPIFREIQMCMGRIKTQVNKVQMMVFIIM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0648 376 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 49 76 IPR028306 -
Lal13g0648 376 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 117 365 IPR028306 -
Lal13g0648 376 PANTHER LIN-9 49 76 IPR010561 GO:0006351|GO:0017053
Lal13g0648 376 PANTHER LIN-9 117 365 IPR010561 GO:0006351|GO:0017053
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0648 Lal-Chr13 4191652 4197596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0648 - - gmx:100816217 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0648 13 4191652 4197596 Lal13g0648 13 4191652 4197596 ECH
Lal12g0588 12 4220945 4235018 Lal13g0648 13 4191652 4197596 LSH