LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal13g0644	ATGGGTTGTGGTTCTGAGCTTCTTACCATGATGATCTTCATCATGACCCTCTTGATGTTCCTATCATTACAAAGAATCCACATTTTAAATGTGAATGATATGTTCATTGAGAATGTGGGGGAGAAGAATGAGAATGGAAATGAAAACCAAGTTAAGAAAATTTCAGGACTTGAAGAGAATGAATTGAAGGAAGCTATGATAGTGGAAAAGTTTAGAGCTTTACTTGGACTCAAGAGTTTTCATACCAAAGTACCATCTCAGTTTCTTTCACCATCAATTTCACCTTCTCCATCACCCAACATAGAAACTTATTCTCCAGCTCCAGCACCTTCTCCAATAGTACCACAAATTCACCCTCATTCACATCATCCAAGACATCATCATTCTCATTGGAATCCACCACTTCACAACAATAAAACTCATGCTAAAGAAGATAGAAGCAAGGATAAGAGAATACTAGTAGCTGTTCTTGTATCTGTGGGAGTTGCTACATTAATTTGTGCTTGTGGTTTGATCTTAGTCTGCAGGAACTTCAGAAATAACAGAAAGAAGCCAAAAAGGAAAGTTCCATTGTGTACCAAGAACAAAGGAACTGGTGGAGGTACTTATCAAAATTCATCAAGCAAGGTGAGTTTAAACTCTGGTGGGTTAGATCTGTCTTATCTTAATGCTTTAGGTGATGATATAGAACAACAAGGGTGTAACTCCAAAAGAACTTGTAAGAATAACACAGAATGTTATGATAATGTTAGTAGTTCTTCCACTAAGGAAATTCTATCTGTCCATGAAGATGAGAGAAAATCAGTAGTGAAAGGTGAATATGAATCTGATGGCAATGGCAACTCTTGTTCTAAGGATAAAATTATCCCTGAAGAAGAAGAAGAATATCATTCATCAAATGATGAAAGTTTTCATTCCTTTGTTGATTCACAACATTCAAATATAAGACTTTCTAATGCTTCAGGTGGTAGCTTTGGTGACACATTTTCTATGTCCCCTCAAAATTCAACTTCATTAGTATCTCCTAATGGCTCATTTTCAAAGACCCAATCTCACCAATCACCATATAGTCCAATACATGAAGAGCAGGAGATTTTTGAAACCTCTCCTAAAATTCTCATGCCTCCTCCACCACCACCACCACCACCTCTACCCCTTCAAATGCCACTTTTTACTTTGCATTCTCTTACTACTTCCTCATCAAGAGTTTCCTCTAACTCTCCACATTCTATGACATCTCATAATTTATCATCTCCAAGAAATTCAGATACTTATTCAGTATCCAATCCAAGTCCAGAAAAACAGTTGCTTTCACCACCTCAACTTAACTCTACAAAATTTCCTCACAGCATTCCACCATCACCACCATGCCCTCCTCCATTTCTCAAAGGCAACAATAACAATAGCAAAACACCACCTCCTCCACCATCTCAATTCCCTCATTTTACACCACTTTGTAAAGATGGAACACCACTACCAAAACTTAAACCACTTCATTGGGACAAAGTAAGAGCTGCACCTAACCGCACAATGGTTTGGGACAAGCTAAGATCAAGTTCATTTGAGTTGGATGAGGAAATGATAGAATCACTTTTTGGCTACAATTTACAAAGTTCAATGAAGAATGATGAAACAAAGAGCAAAAGCCCATCCCCAAGCAAGCATGTACTTGAGCCAAAACGGCTACAGAACATTACAATACTAAAAAAAGCTCTGAATTTGACATCTGAACAAGTATGTCAAGCCTTAACACAAGGTAAATAA	1764	0.3747	MGCGSELLTMMIFIMTLLMFLSLQRIHILNVNDMFIENVGEKNENGNENQVKKISGLEENELKEAMIVEKFRALLGLKSFHTKVPSQFLSPSISPSPSPNIETYSPAPAPSPIVPQIHPHSHHPRHHHSHWNPPLHNNKTHAKEDRSKDKRILVAVLVSVGVATLICACGLILVCRNFRNNRKKPKRKVPLCTKNKGTGGGTYQNSSSKVSLNSGGLDLSYLNALGDDIEQQGCNSKRTCKNNTECYDNVSSSSTKEILSVHEDERKSVVKGEYESDGNGNSCSKDKIIPEEEEEYHSSNDESFHSFVDSQHSNIRLSNASGGSFGDTFSMSPQNSTSLVSPNGSFSKTQSHQSPYSPIHEEQEIFETSPKILMPPPPPPPPPLPLQMPLFTLHSLTTSSSRVSSNSPHSMTSHNLSSPRNSDTYSVSNPSPEKQLLSPPQLNSTKFPHSIPPSPPCPPPFLKGNNNNSKTPPPPPSQFPHFTPLCKDGTPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQSSMKNDETKSKSPSPSKHVLEPKRLQNITILKKALNLTSEQVCQALTQGK	587

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	397	479	-	-
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	326	359	-	-
	Lal13g0644	587	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	455	586	-	-
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	370	389	-	-
	Lal13g0644	587	PANTHER	FORMIN-RELATED	11	586	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	371	388	-	-
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	257	287	-	-
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	118	146	-	-
	Lal13g0644	587	Pfam	Formin Homology 2 Domain	490	586	IPR015425	-
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	397	448	-	-
	Lal13g0644	587	PANTHER	FORMIN-LIKE PROTEIN	11	586	-	-
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	258	273	-	-
	Lal13g0644	587	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	485	587	IPR015425	-
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	326	358	-	-
	Lal13g0644	587	MobiDBLite	consensus disorder prediction	119	134	-	-
	Lal13g0644	587	Gene3D	Formin, FH2 domain	486	587	IPR042201	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal13g0644	Lal-Chr13	4161545	4166129	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal13g0644	12	587	FH2 protein (formin) Gene Family	AT3G05470	32.455	6.26e-56	201

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal13g0644	-		-	gmx:100811929	550.436