Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0596 ATGGGAGGAGGTGGAGCAACGTGGTACGCGGAGGCGCAGTATACATCGGCGAAGACATCAGTGTGGTGGGATATTGAGAATTGTCAAGTTCCCAAAGATTGCGATCCTCACGCCATTGCTCAGAACATTAGCTCTGCTCTTTTTCATATTGAATGTTGTGGCCCCGTTTCTATCTCCGCTTACGGCGACACCACTCGCATCACTTCCTCCGTTCAAAAAGCTCTCTCCAGCACCGGCATCTCTCTCAACCATGTCCCCGCCGGTGTTAAAGATGCTAGCGACAAGAAGATTCTTGTGGACATGCTGTTCTGGGCTGTGGACAATCCTGCACCTGCTAATTATTTATTAATTTCGGGGGACCGAGACTTCTCCAATGCTCTTCATCAATTGCGGATGAGGAGATATAATATCCTCATTGCGCAACCTCAGAGAGCATCAGCACCCCTAGTTGCAGCCGCTAAGAGCGTGTGGCTTTGGACTAGTCTCTTGGCTGGAAAACCTCCTCTTACTAATGGTGAATTACAACAACTTAGTAATAATACCTTCCAATCATCTTCAGATACCTTACCAATTCCAGTATCTAATTCCGTTCACATACTGCAACATGTGGACTCCTATTCAGATGATCATATAGGAAGGGGCTTTGATTCCAGACATCAGGGGAAGACAGCTGGGAGAAGTCCAAGTAAACCAAATGGACCCAATGCCATGAATTCTGCTCCTGTTGGGCTTCATGAAAATCGTAACAATATAAACTATTTTCGACCTGGAAACCATAACTCAAATATTTCCCCAAATGTATCTGGTCCAAATCTTATGCATGACAATTCTGATATGTTATGGAGCAATAGCAGTAATCAACAGGGAAATCATCAAAACCTACATTCACAATCATTAAGATCAAATAGTTTTCCTTCACGACCTCCTTTTGTTCCAACTAGCACATATTCTCCAAATCCTCCTTTGCAACCTCCTTTTGTTCCAACTAATTCATATTCTCCAAATCCCCAAAACTTTGGAATTTCAGTAGTACCACCTTGGAGTGGTAGACCCAGCTTCTCTGTACCGCTTACAAATGTGATGGATACGGGTGGTCCAAACATTTCTGTGTATCCCAGTAGTGCTCATGATCTTTGCCTGGTTAAGCAATGGAATGGAAAGTTGAAACAGAGTTCCAACAGTAGTACCCCACATCCTGTCAGGCTGTTTGGCAAACAAAATGGACATATGGTGCATAGCACACAGCAATCACACAATGGCTATCCACATCGTCCTGATTATCGATCTAAATCGTCAGCACCCATGGGTGACAAAATTGTTCCTGGTAATGGTGTATGGAGGTCTGAAGGACGCCCTAAACCTTCTGAATACGTACAAGGTCTTATAGGGGTTATTTTACTTGCCTTGAATACACTAAAAACTGAGAAAATCATGCCAACTGAGTCAAGTATAGCTGACTGCCTTCGTTATGGAGATCCCAAACACCACAACACTGACGTTAAGAAGGCTCTGGAGCGTGCTATTGAGCAGCAGGTGGTGGTGAAACAGAACATAGGTTCTTTGCAGTTATATGTTGGTAAGAATGATAAAGTTTGGAAGTGTGTGAACCCTGAAGGTGGTAATCCCAAGCAGTATTCTCTAGAAATATGA 1650 0.437 MGGGGATWYAEAQYTSAKTSVWWDIENCQVPKDCDPHAIAQNISSALFHIECCGPVSISAYGDTTRITSSVQKALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILIAQPQRASAPLVAAAKSVWLWTSLLAGKPPLTNGELQQLSNNTFQSSSDTLPIPVSNSVHILQHVDSYSDDHIGRGFDSRHQGKTAGRSPSKPNGPNAMNSAPVGLHENRNNINYFRPGNHNSNISPNVSGPNLMHDNSDMLWSNSSNQQGNHQNLHSQSLRSNSFPSRPPFVPTSTYSPNPPLQPPFVPTNSYSPNPQNFGISVVPPWSGRPSFSVPLTNVMDTGGPNISVYPSSAHDLCLVKQWNGKLKQSSNSSTPHPVRLFGKQNGHMVHSTQQSHNGYPHRPDYRSKSSAPMGDKIVPGNGVWRSEGRPKPSEYVQGLIGVILLALNTLKTEKIMPTESSIADCLRYGDPKHHNTDVKKALERAIEQQVVVKQNIGSLQLYVGKNDKVWKCVNPEGGNPKQYSLEI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0596 549 CDD PIN_limkain_b1_N_like 18 142 - -
Lal13g0596 549 PANTHER LIMKAIN B LKAP 2 546 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lal13g0596 549 MobiDBLite consensus disorder prediction 222 310 - -
Lal13g0596 549 MobiDBLite consensus disorder prediction 210 320 - -
Lal13g0596 549 Gene3D - 10 161 - -
Lal13g0596 549 MobiDBLite consensus disorder prediction 412 452 - -
Lal13g0596 549 Pfam NYN domain 18 154 IPR021139 GO:0004540
Lal13g0596 549 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0596 Lal-Chr13 3883014 3886715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0596 10 180 C2H2 Transcription Factor Family AT5G61190 73.684 1.72e-78 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0596 - - lang:109346239 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0562 12 4024036 4028056 Lal13g0596 13 3883014 3886715 ECH
Lal13g0596 13 3883014 3886715 Lal13g0596 13 3883014 3886715 ECH