Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal13g0586 | ATGGTCAGTGAAGGTACAGCTACATGCATAGACATAATCCTTGCCATCATTCTTCCTCCTCTTGGAGTCTTCCTCAAATATGGCTGCAAGGTGGAGTTTTGGATCACTTTGGTGTTGACCATTTTTGGATATCTCCCTGGAATTATTTATGCTGTCTATGCTATAACCAATAGGTTGTGGTTATCAAGAACGTTTTTGACAAAATTTAATAAGTAA | 216 | 0.3796 | MVSEGTATCIDIILAIILPPLGVFLKYGCKVEFWITLVLTIFGYLPGIIYAVYAITNRLWLSRTFLTKFNK | 71 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal13g0586 | 71 | ProSitePatterns | Uncharacterized protein family UPF0057 signature. | 13 | 28 | IPR000612 | GO:0016021 | |
| Lal13g0586 | 71 | PANTHER | HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED | 1 | 56 | IPR000612 | GO:0016021 | |
| Lal13g0586 | 71 | Pfam | Proteolipid membrane potential modulator | 9 | 55 | IPR000612 | GO:0016021 | |
| Lal13g0586 | 71 | PANTHER | - | 1 | 56 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal13g0586 | Lal-Chr13 | 3829029 | 3830233 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal13g0586 | 5 | 57 | RCI2 Gene Family | AT3G05890 | 77.358 | 1.07e-24 | 85.1 |