Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0582 ATGGAGAAGCATTTCTGGGTTGGCGTTATAATTGTTTTGAGTAACTTTGTTCACGCCTTTGAAACCTATCACATCAATGAAACAGAGTTGTTTTTTTTGGAAGCTCATGAAGAATCTGTATCTTTGGTTGGGAGGAATCCTCTTATGGTTGGAATCACTCTTATTCAAGCTGCTGCTGCTAAAGGAGCAGTGTGTACGGATGGAACCTTACCCGCTTATCATTTGCATAGGGGATATGGATCTGGAGCAAATAGTTGGCTTGTTAATCTAGAGGGAGGTGGATGGTGTAATAATGTTAGATCATGTGTTTTTCGCAAGAAAACACGGCGTGGATCATCTGCATTCATGGAGAAGGAGATACCTTTTACAGGAATTTTAAGCAATAATCCTCAAGAAAATCCAGATTTTTTCAACTGGAACAGAGTAAAGATTCGTTATTGTGATGGTGCCTCTTTTACTGGGGATAGCGAACATAAGGATGCACAACTGCAATTCAGAGGAGAACGTATTTGGTGGGCTGCTATAGAGGAGTTGAAATCAAAGGGAATGCATTATGCCAAGCAGGCTCTTCTTTCTGGATGCTCTGCTGGTGGTTTGGCTACTATCATTCACTGTGATGAATTTCGAGGTCTATTCCCAAGGACTACCAAAGTAAAGTGTCTTAGTGATGCCGGGTTATTTCTTGATGCGCCAGATGTATCTGGTGGGCATACCCTCAGGGATTTTTTCAGCAGCGTAGTAAATTTGCAGGGGGTGCAGAAGAATCTGCCATTTTCTTGTACTAATCACCTTGACCCCACTTCGTGCTTCTTTCCTCAGAACTTGATTGGTGGAGTTAGAACGCCACTATTCATTCTTAATACCGCCTATGATTCATGGCAGATCCAGTCAAGCTTAGCTCCTCCATCGGCAGATCCCCATGGCTATTGGCGCGATTGTAGATCAAACCATGCTAAATGTACTGGTTCACAAATCCGATTTCTGCAAGGTGGATTCAGGAATCACATGCTGAATGTTGTTAAGGGTTTTTCAAGATCAAATCAGAATGGGTTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCGGACAATTCCCCTGCCATTGGGAACAAGGCAATTGCTCTGGCTGTAGGAAGTTGGTATTTCGACCGTGCGATTGTTAAGGACATTGATTGTCCTTACCCTTGTGATAATACATGCCACAATCTGGTTTTCAGACAAGCCAAATCTCATCACTAA 1263 0.426 MEKHFWVGVIIVLSNFVHAFETYHINETELFFLEAHEESVSLVGRNPLMVGITLIQAAAAKGAVCTDGTLPAYHLHRGYGSGANSWLVNLEGGGWCNNVRSCVFRKKTRRGSSAFMEKEIPFTGILSNNPQENPDFFNWNRVKIRYCDGASFTGDSEHKDAQLQFRGERIWWAAIEELKSKGMHYAKQALLSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDAPDVSGGHTLRDFFSSVVNLQGVQKNLPFSCTNHLDPTSCFFPQNLIGGVRTPLFILNTAYDSWQIQSSLAPPSADPHGYWRDCRSNHAKCTGSQIRFLQGGFRNHMLNVVKGFSRSNQNGLFINSCFAHCQSERQDTWFADNSPAIGNKAIALAVGSWYFDRAIVKDIDCPYPCDNTCHNLVFRQAKSHH 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0582 420 PANTHER PECTIN ACETYLESTERASE 4 413 - -
Lal13g0582 420 PANTHER NOTUM-RELATED 4 413 IPR004963 GO:0016787
Lal13g0582 420 Pfam Pectinacetylesterase 46 393 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0582 Lal-Chr13 3798176 3802804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0582 49 415 Carbohydrate Esterase AT1G57590 71.935 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0582 K19882 - gmx:100788448 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0567 13 3707710 3712240 Lal13g0582 13 3798176 3802804 ECH
Lal19g1166 19 15145456 15151324 Lal13g0582 13 3798176 3802804 ECH
Lal13g0582 13 3798176 3802804 Lal13g0582 13 3798176 3802804 ECH