Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0570 ATGGGTAATGGTACTTCTCGTGTTGTTGGCTGTTTGGTACCATTCAATGGCAAAGGTGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGGTTAGGTCATTCCTTCTGTTATGTGAGACCATCCATCTTTGAATCTCCTGCCATTACCCCGTCGAATTCTGAGAGGTATACTCTTGATTCCAGTACCCTTGATTCGGAAACTTTAAGCGGATCCTTTCGGCATGATAGCATGGAAGATTCTTCAGGCATACACAAGCCGGGTAAGAATTTTCCGGAAACTACTTTTAAGTCAATTTCCGGGGCTTCTGTCAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAGTGCATTATTTGCTAGTGATGTCCTGGAACCTGCTGCTTCGTTTGAGGGAACTGCCTCATTTGCTGCTATCCCTTTGCAGCCTGTTCCGCGTGGTTCTGGACCTTTGAATGGTTTCATGTCCGGACCTCTGGAGAGAGGTTATGCCTCAGGTCCGTTGGATAGGGGTGGTGGTTTCATGTCTGGGCCAATAGAGAAGGGAGTTATGTCAGGCCCTCTTGATGATAACGATAAATCCAACTTTTCAGCGCCACTTGCGCGTGGTCGCCGGAGGCCTCGTCTCCAGCATCTCATGAGAAGTGTAAGTGGACCAATGAAGAATACTTTTTCGCGGACTTTCTCTAAGAACTCTACTGGTGGCAGTTGGATGCAGCGGTTATTGTTTCATCCAGTGACCCAACTAGCTTGGCATTTCAGAGAGGCAAAATTTCAATCCGAAGTTGCTAGAAACTGTGTTGAAGTTGGATCATCTGAAGTGGAGTATAAACATACACATAATTTGCAGTGGGCTCAAGGCAAGGCTGGTGAAGATAGGGTTCATGTAGTGCTTTCTGAAGAACAAGGGTGGCTGTTTATTGGGATATATGATGGTTTTAGTGGCCCAGATGCACCTGATTTTCTGATGAGCCATCTTTATAGATTTATAGACATGGAACTGGAAGGGTTACTTTGGGATTATGAAGATAATCCTGTAGATCCACATCCACTTGAACCTGAAGTCCCGAAAACTGTAAAATCTATGGACGCTCCAGTAAGCAATAGGGGAGAGCTATCTGATGTTTATACTAATTCAAATCAAGAAAGTTTAGATTCTTCTTCTGGTCCAGTGATAATCCAGGATCAGTCATCTAACAGTGAGATAGTTGAGGATAATGCTGAAAACAAGTTACCTAACTGCGGAAGTTCTACTATCCCATGTACTGCTCCAGCCTCTGTTCCATTGGGACAATTGTCCGGTAAAGGTAGAAAAAGTGTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGGATGAACAGGGTCTTTTCCCTGCCTCAGAACAAGGTAAGGATTCTTGTGTTCCTAGGGAATCAACAACACTAGAGGGGCTTGTGAGACCTTGCTCATCTAATTTAAAAGAAGAAAGATCTGGAAATCGAGATGAAGATCCCACCACATCAGGAAAAAATGGAAGCATTGGGTTCGATGCAACGAAAAAGGAGCCCATAGCTGCTTTTTCTGTTTCAGTGCAACGGCAGAATTCAAGAAAGTCATTTATCAGTACAAAAATCAGACAAATGTACAGGAAGCCAAAGTCCCTATGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAAGAAGCTTTTGTTGATGAGAAACTAGTGGAAGCCTCAGGACCCATTAGAAAGTGCAAGTCTGGAATCGATCATAATGCAGTTTTAAGAGCAATGAAACGAGCCCTTGAAAGAGCAGAAGAGGCGTACATGAAAATGGTGGAGAATAATCTGGATAAAAATCCAGAGCTTGCCTTAATGGGATCGTGTGTTCTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTTGTGTGATTTTGGCTCAAGAGAGACCAAATGATCGTCATCCTAATCCAAGTTTTGTCAAGGATGAAAAGAGGCATAAAAACCGATCTAGAGAGTCATTAGTACACATGGAGCTGGATCGGATTTCAGAGGAGTCCCCTATTCACAATCAAAACAGTGATGTTAATAAGATGAACAAAAACAGAGAAATATCTATATGCAGATTGAAAATGAGGGCTGTTCAGGTTTCCACAGATCACAGCACAAATAATGAAGAGGAAGTTTTTAGAATAAGAACAGAACATCCTGATGATAATCAAGCCATATTAAATGGTAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCTGGGTTCTTGAAGAGGCCATCATTCAACGAAGCTGTGCTAGAGATGTTTCAAGTTGATTATGTGGGAACTGCTCCTTACCTAAGTTGCACACCTTCTGTTTTGCATCAAAGACTTTCGTCAAGTGACCGGTTCATGGTACTCTCCTCCGATGGGCTTTACCAGTATTTCAGCAATGAAGAGGTAGTAGCCCATGTTACATGGTTCATGGAAAATGTCCCGGAAGGTGACCCGGCACAATACCTTATTGCAGAGCTTCTCTTCCGCGCTGCTAAAAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTAATGGGGATAGACGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTAGAAGGGAGAATTTGGAGATCATCAGGATAA 2682 0.4258 MGNGTSRVVGCLVPFNGKGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERYTLDSSTLDSETLSGSFRHDSMEDSSGIHKPGKNFPETTFKSISGASVSANVSTARTGNQSALFASDVLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGYASGPLDRGGGFMSGPIEKGVMSGPLDDNDKSNFSAPLARGRRRPRLQHLMRSVSGPMKNTFSRTFSKNSTGGSWMQRLLFHPVTQLAWHFREAKFQSEVARNCVEVGSSEVEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFIDMELEGLLWDYEDNPVDPHPLEPEVPKTVKSMDAPVSNRGELSDVYTNSNQESLDSSSGPVIIQDQSSNSEIVEDNAENKLPNCGSSTIPCTAPASVPLGQLSGKGRKSVRLYELLQMESWDEQGLFPASEQGKDSCVPRESTTLEGLVRPCSSNLKEERSGNRDEDPTTSGKNGSIGFDATKKEPIAAFSVSVQRQNSRKSFISTKIRQMYRKPKSLCKKLFPWSYDWHREEAFVDEKLVEASGPIRKCKSGIDHNAVLRAMKRALERAEEAYMKMVENNLDKNPELALMGSCVLVMLMKDQDVYVMNLGDSCVILAQERPNDRHPNPSFVKDEKRHKNRSRESLVHMELDRISEESPIHNQNSDVNKMNKNREISICRLKMRAVQVSTDHSTNNEEEVFRIRTEHPDDNQAILNGRVKGQLKVTRAFGAGFLKRPSFNEAVLEMFQVDYVGTAPYLSCTPSVLHQRLSSSDRFMVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPNGDRRKYHDDVSVMVVSLEGRIWRSSG 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0570 893 Gene3D - 510 890 IPR036457 -
Lal13g0570 893 Gene3D - 251 416 IPR036457 -
Lal13g0570 893 PANTHER PROTEIN PHOSPHATASE 2C 32 15 893 - -
Lal13g0570 893 SUPERFAMILY PP2C-like 288 885 IPR036457 -
Lal13g0570 893 MobiDBLite consensus disorder prediction 657 674 - -
Lal13g0570 893 Pfam Protein phosphatase 2C 709 855 IPR001932 -
Lal13g0570 893 MobiDBLite consensus disorder prediction 479 511 - -
Lal13g0570 893 SMART PP2C_4 276 882 IPR001932 -
Lal13g0570 893 PANTHER PROTEIN PHOSPHATASE 2C 15 893 IPR015655 GO:0004722|GO:0006470
Lal13g0570 893 MobiDBLite consensus disorder prediction 652 674 - -
Lal13g0570 893 Coils Coil 591 611 - -
Lal13g0570 893 CDD PP2Cc 590 884 IPR001932 -
Lal13g0570 893 ProSiteProfiles PPM-type phosphatase domain profile. 276 884 IPR001932 -
Lal13g0570 893 MobiDBLite consensus disorder prediction 63 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0570 Lal-Chr13 3729033 3736517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0570 1 893 PP2C-type Phosphatase Gene Family AT2G46920 64.784 0.0 1109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0570 - - cam:101510249 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0570 13 3729033 3736517 Lal13g0570 13 3729033 3736517 ECH