Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0551 ATGGGTGCTGCAAGTGATTTCACTGCGAGTGTGATCGACGAAGAAGTGGTAACATCGGTGCTGCCAATGCAAGAGCATTGGCTACCACTCTCAAATCTTGATCTGCTTCTTCCTCCGTTGAATGTTGGGGTCTTTTTTTGCTACAAGAAATGCATACCAACGTCTACAATGAACTTTGGGTCCATGGTGGGGTCTCTAAAAAAGGGTTTAGCTCAGGCTTTGGTGTCCTACTATGCCTTTGCAGGTGAAGTGGTTGTTAACACTACAGGTGAACCTGAACTGCATTGTAATAATCGTGGGGTTGATTTTGTTGAAGCTGTAGCAGACATTGAACTAAAGTGCCTTAACTTTTACAACCCTGATCATACATTTCAAGGGAAGCTTGTTCCAGAGAAGAAACATGGTGTGCTTGCTGTTCAGGCCACTTGGCTGAAGTGTGGTGGGATAGTTGTGGCATGCACATTTGATCATCGTATAGCTGATGCCTACTCAGCAAATATGTTCCTCATATCGTGGGCCGAGATGGCCCGGCCCATCAAGCCCGCATCAACGATTAACTTTCCGCCATGTTTCCGTCGTTCCCTTCTCAGCCCTCGCCGTCCACCAGGTTTCATCCACCCTTCCCTCGACAACATGTACATCTCCACCTCCGACCTCTCTCCTCCTCCTTCAACCACCACCAACGCCACCGTTATTCTCAGCCGCATATACTATGTCATGGCAGAGGATATCCACTGCATGCAGTCGCTTGCCACCAAAAATGGCACTGCCAAACGCACAAAGCTCGAGTCTTTCTCCGCGTTCTTGTGGAAGATGGTTGCTCGTGCAGCTTCAGTAGACGAAAATGGCAAAAGGGTCATCGCCAAAATGGGTATTGTGGTTGATGGAAGGAAGTGTCTTAGTCTTAGCAATTGTAGTGGTGATAATAAAGGTAAAAACGAAATGATGGGTTGTTATTTTGGGAACGTACTTTCCATTCCATTTGGCGGGAAACCGGTGGAGGAGCTGGTAGAGAAGCCGTTATGGTGGGTGGCGAATGAGGTTCATGAGTTCATGGCAGCGGCGACCAAGGAGGAGCACTTCTTAGGGCTTATTGATTGGGTTGAAGCACACCGGCCGGTCCCTGGCTTGGCGCGGATTTATTGTTGTGGAGACGATGAGGGACCAGCTTTTGTGGTTTCTTCTGGACAAAGGTTCCCACAGGAGAAGGTGGATTTTGGGTGGGGTAAGGCTGTGTTTGGATCGTACCATTTTCCTTGGGATGGAGAAGCTGGTTATGTGATGCCAATGCCGAGCCCTCTTGGGAATGGTGATTGGGTTGTATACATGCACCTTGGGGAGGGACTGTTGGAGATCATAGAGTGTGAGGGTGCTCATATCTTTAGGCCCTTAACTTGGGATTACCTAACTCAGTGA 1416 0.4859 MGAASDFTASVIDEEVVTSVLPMQEHWLPLSNLDLLLPPLNVGVFFCYKKCIPTSTMNFGSMVGSLKKGLAQALVSYYAFAGEVVVNTTGEPELHCNNRGVDFVEAVADIELKCLNFYNPDHTFQGKLVPEKKHGVLAVQATWLKCGGIVVACTFDHRIADAYSANMFLISWAEMARPIKPASTINFPPCFRRSLLSPRRPPGFIHPSLDNMYISTSDLSPPPSTTTNATVILSRIYYVMAEDIHCMQSLATKNGTAKRTKLESFSAFLWKMVARAASVDENGKRVIAKMGIVVDGRKCLSLSNCSGDNKGKNEMMGCYFGNVLSIPFGGKPVEELVEKPLWWVANEVHEFMAAATKEEHFLGLIDWVEAHRPVPGLARIYCCGDDEGPAFVVSSGQRFPQEKVDFGWGKAVFGSYHFPWDGEAGYVMPMPSPLGNGDWVVYMHLGEGLLEIIECEGAHIFRPLTWDYLTQ 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0551 471 Gene3D - 224 455 IPR023213 -
Lal13g0551 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 466 - -
Lal13g0551 471 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 466 - -
Lal13g0551 471 Pfam Transferase family 11 457 - -
Lal13g0551 471 Gene3D - 9 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0551 Lal-Chr13 3586977 3589892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0551 31 454 Monolignol Biosynthesis Gene Families AT5G48930 26.531 1.89e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0551 - - gmx:100785067 640.573