Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0548 ATGGGTAGTAGTACTATATACATGCATGTAATGTTCTCTACCTTGGTTCTAATTCTCTCACTTTCATCATCGACCTCAGCATCTTTGAAGGTGGGTTTCTATAAAACTTCATGTCCATCTGCTGAGGCAATAGTGAGAAAAGCTGTTAATAAAGCCGTTTCTCTCAACCCGGGCATGGCTGGTGGCTTGATTAGAATGCATTTTCATGATTGCTTTGTGAGGGGTTGTGATAGTTCTGTACTACTAGAATCCACACCAGGAAACCCAGCCGAAAGAGATCACCCGGCCAACTATCCAAGTTTGCGTGGCTTCGAGGTGATAGAAGAAACTAAGGCTCAACTAGAAGCATCATGTCCTAACACCGTGTCCTGTGCAGACATTGTTGCTTTCGCGGCACGAGACAGCGCTACCAAACTTGGTGGCATAAACTACAATGTTCCATCAGGACGCAGAGATGGTCGAATATCAATTAAAGACGAAGTAGTAGGAAATCTTCCACCACCAACCTTCAATGCTGATCAACTTATTACTATATTTGCTCAAAAAGGGTTATCATTAGATGAAATGGTAACACTTTCAGGAGCACATTCTATTGGTGCATCACATTGTTCTTCATTCTCCAACCGCTTATATTCTTTTAATGCTACACATCCTCAAGATCCCTCTATGGATCCTAAGTTTGTTACATTGTTGAAAACAAAGTGTCCATCAAAATCAAGCAATGCTGATAGTATAGATCCAACAGTGGCCCTTGATGCTTCCACACCGAACCGTTTGGATAATAAGTACTACAAGGAAGTGAAGAACAACCGTGGTTTATTGACCTCAGATCAGACATTGTTAAGCAATGGTTTGACAAGGCAAAAGGTGCTAACCAATGCCAAATATGGTTCAAGTTGGACAATAAAGTTTGCTAAAGCAATGGTGCATATGGGTTCTATACAAGTGCTAACTGGCTCTGAAGGAGAGATTAGGAAGCATTGTGGCGTTGTTAATTCAATGTAG 1005 0.4139 MGSSTIYMHVMFSTLVLILSLSSSTSASLKVGFYKTSCPSAEAIVRKAVNKAVSLNPGMAGGLIRMHFHDCFVRGCDSSVLLESTPGNPAERDHPANYPSLRGFEVIEETKAQLEASCPNTVSCADIVAFAARDSATKLGGINYNVPSGRRDGRISIKDEVVGNLPPPTFNADQLITIFAQKGLSLDEMVTLSGAHSIGASHCSSFSNRLYSFNATHPQDPSMDPKFVTLLKTKCPSKSSNADSIDPTVALDASTPNRLDNKYYKEVKNNRGLLTSDQTLLSNGLTRQKVLTNAKYGSSWTIKFAKAMVHMGSIQVLTGSEGEIRKHCGVVNSM 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0548 334 Gene3D - 32 332 - -
Lal13g0548 334 CDD secretory_peroxidase 30 331 IPR033905 GO:0004601|GO:0042744
Lal13g0548 334 PANTHER PEROXIDASE 25-RELATED 14 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 Gene3D Peroxidase, domain 2 166 311 - -
Lal13g0548 334 PANTHER PEROXIDASE 14 330 - -
Lal13g0548 334 SUPERFAMILY Heme-dependent peroxidases 29 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Lal13g0548 334 ProSiteProfiles Plant heme peroxidase family profile. 28 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0548 334 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0548 Lal-Chr13 3566444 3567914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0548 8 333 Peroxidase AT1G05260 46.809 3.92e-97 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0548 K00430 - gmx:100815158 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0548 13 3566444 3567914 Lal13g0548 13 3566444 3567914 ECH