Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0533 ATGGAGAGCAAAACCTTCCCTAAACAAGACTCAGAAGAATCTCTAGAGCTCAAACCAGAAACTAATGAACCCCGGAAACGGAAAATGGTTCAGAAAACGGTGGTGATGGTGAAGATAGGAGAGAATGTTAGCAAACTGAAGAATGAAGGGTTACCTTCTGATTTTTGGTCTTGGAGGAAATATGGACAAAAGCCAATTAAAGGGTCTCCTCATCCAAGGGGATATTATAGGTGCAGCACATGCAAGGGTTGTTTAGCAAAAAAACAAGTAGAGAGATGCAGGACAGATGCATCAATGCTCATAATCACATATACCTCTACACATAACCACCCAGCTCCTAATCATGTCCCATCCTCCACAAATCTAGTCCAAAAACCAAAACAACCTGAAACCCAAAACATAGAATATGATCCTAGTATTCTTACCCTAAAGGAGGAAGACCAAGAAAGGAAACAAGAGAAGCTGAATCATAATGTGTCCACCATGACAAGTCATGACAATGGTACAAATGAAGAAAAGTTTAATTACTTGCAATCTCCAACACCTAAATCAGAAGAACTTGATTTTTTCGATGAACTTGAGGAGCTACCTATGTCTTCATCTTTCCTAGACTATACAAGGAGCAGTTTTTCCAATGAAATGATTCCCGTTGTCCCTTCTTGA 663 0.3967 MESKTFPKQDSEESLELKPETNEPRKRKMVQKTVVMVKIGENVSKLKNEGLPSDFWSWRKYGQKPIKGSPHPRGYYRCSTCKGCLAKKQVERCRTDASMLIITYTSTHNHPAPNHVPSSTNLVQKPKQPETQNIEYDPSILTLKEEDQERKQEKLNHNVSTMTSHDNGTNEEKFNYLQSPTPKSEELDFFDELEELPMSSSFLDYTRSSFSNEMIPVVPS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0533 220 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal13g0533 220 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal13g0533 220 MobiDBLite consensus disorder prediction 160 181 - -
Lal13g0533 220 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal13g0533 220 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 13 203 - -
Lal13g0533 220 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 203 IPR044810 GO:0003700
Lal13g0533 220 Gene3D WRKY domain 37 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal13g0533 220 SUPERFAMILY WRKY DNA-binding domain 49 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal13g0533 220 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0533 Lal-Chr13 3462212 3463610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0533 11 202 WRKY Transcription Factor Family AT4G01250 43.564 2.07e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal13g0533 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0533 - - qsu:111985760 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0533 13 3462212 3463610 Lal13g0533 13 3462212 3463610 ECH