Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0528 ATGGCTTCGATTCAACGCGCTTCCGCCAGTTCAGGATCCGAAGGTGGAGAACCTGCTACGGTGGACGATAGGAAGAGGAAGAGGATGATATCGAACCGCGAATCCGCGAGGCGATCACGGTTGAGGAAGCAGAAGCTTCTAGAAGATTTGACTGAAGAAGTGAATCGTTTTCTAAACTCAAACAAGGAGATAGTCCAGAGCATCAAAACGAAGGAGGACGCGTATTCCAAAATGGAATCTGCCAACAACATTCTCAGAGCTCAGACTATGGAACTCGCGGATCGATTACAGTCTCTGAATTCGATCATTAATATAGCTGAAGAAGTTAACGGTAAAGGTAATGGTTTATTCTTTCAGATATCTCAGATTTCAGATCCACTCATGAACCCGTGGCATCAAAACTATCGGTTTCACCCTCTCATGCCGTCTCCGAATATGTTCATGCATTGA 450 0.4511 MASIQRASASSGSEGGEPATVDDRKRKRMISNRESARRSRLRKQKLLEDLTEEVNRFLNSNKEIVQSIKTKEDAYSKMESANNILRAQTMELADRLQSLNSIINIAEEVNGKGNGLFFQISQISDPLMNPWHQNYRFHPLMPSPNMFMH 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0528 149 MobiDBLite consensus disorder prediction 1 40 - -
Lal13g0528 149 Coils Coil 33 53 - -
Lal13g0528 149 CDD bZIP_plant_GBF1 25 76 IPR045314 GO:0003700|GO:0006355
Lal13g0528 149 MobiDBLite consensus disorder prediction 18 40 - -
Lal13g0528 149 MobiDBLite consensus disorder prediction 1 15 - -
Lal13g0528 149 Pfam bZIP transcription factor 23 82 IPR004827 GO:0003700|GO:0006355
Lal13g0528 149 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 148 - -
Lal13g0528 149 Gene3D - 23 104 - -
Lal13g0528 149 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 148 - -
Lal13g0528 149 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Lal13g0528 149 SUPERFAMILY Leucine zipper domain 24 73 IPR046347 GO:0003700|GO:0006355
Lal13g0528 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 85 IPR004827 GO:0003700|GO:0006355
Lal13g0528 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0528 Lal-Chr13 3439023 3439472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0528 1 147 bZIP Transcription Factor Family AT3G62420 45.270 6.43e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal13g0528 bZIP_1 1.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0528 K25786 - gmx:778130 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0528 13 3439023 3439472 Lal13g0528 13 3439023 3439472 ECH
Lal12g0525 12 3753075 3753518 Lal13g0528 13 3439023 3439472 ECH
Lal12g0525 12 3753075 3753518 Lal13g0528 13 3439023 3439472 LSH