Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0506 ATGTCCAACTCCACCAATTCACATGCCCCTAATTCTAAGGGTTTCCTATGCAATGCTGCCGCTGGTGCTGCTGCAGGATTTATTGCTGCTGCATTTGTTTGCCCTTTAGATGTTATCAAAACTCGATTACAGGTTCATGGCACCCCTCAGCTCCGTAATTCAACTGTTAAAGGCAGTCTCATTGTTGGTACTTTGGAACAGATATTTGAAAGGGAGGGTTTGCGTGGCATGTACCGAGGGCTAGCCCCAACCGTGTTGGCTTTACTTCCGAATTGGGCTGTTTATTTTACTATTTATGAACATTTCAAGAGCCTGCTTTCTTCTACGGATGAAAGTCACCATCTTTCAATTGGAGCTAATGTGGTAGCTGCTTCTGGGGCTGGAGTGGCAACTACCATTGCTACAAATCCACTTTGGGTTGTCAAGACTAGGCTCCAAACCCAGGGAATGAGACCTGGTGTTGTGCCATACAAGAGCACAATATCTGCTTTAAGAAGAATTTCTCATGAGGAGGGCATTCGAGGGCTGTACAGGTCGATATCCTTGACCGTAAACAGTGGCCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCCACTTATGAGAAAATAAAATTTTATTTGGCAAAGCAAGATGACAGAGCAATTGAAAAGCTTGGTGCACGTGATGTTGCAATCGCTTCATCGGTCTCCAAAATTTTTGCGTCCACTTTGACATATCCTCATGAGGTTGTTCGTTCTAGACTTCAAGAACAAGGGCATCACTCAGAAAAGCGGTACTCTGGTGCTACTGACTGTATTAGAAAGATATTTCAACAAGAGGGCCTTTCTGGTTTTTACCGTGGGTGTGCCATCAACCTACTGAGGACAACACCAGCTGCTGCAATCACATTCACCAGCTTTGAAATGATAAACCGTTTTCTTGTTTCACGCTTCCATTCTGATCCTTGTCCTCCTATTTTGTGA 978 0.4458 MSNSTNSHAPNSKGFLCNAAAGAAAGFIAAAFVCPLDVIKTRLQVHGTPQLRNSTVKGSLIVGTLEQIFEREGLRGMYRGLAPTVLALLPNWAVYFTIYEHFKSLLSSTDESHHLSIGANVVAASGAGVATTIATNPLWVVKTRLQTQGMRPGVVPYKSTISALRRISHEEGIRGLYRSISLTVNSGLVPALAGISHVAIQFPTYEKIKFYLAKQDDRAIEKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGATDCIRKIFQQEGLSGFYRGCAINLLRTTPAAAITFTSFEMINRFLVSRFHSDPCPPIL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0506 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 105 IPR018108 -
Lal13g0506 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 211 IPR018108 -
Lal13g0506 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 311 IPR018108 -
Lal13g0506 325 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 322 IPR044712 GO:0006862|GO:0055085
Lal13g0506 325 SUPERFAMILY Mitochondrial carrier 13 307 IPR023395 -
Lal13g0506 325 Gene3D Mitochondrial carrier domain 111 319 IPR023395 -
Lal13g0506 325 Gene3D Mitochondrial carrier domain 1 110 IPR023395 -
Lal13g0506 325 Pfam Mitochondrial carrier protein 13 107 IPR018108 -
Lal13g0506 325 Pfam Mitochondrial carrier protein 229 314 IPR018108 -
Lal13g0506 325 Pfam Mitochondrial carrier protein 115 215 IPR018108 -
Lal13g0506 325 PRINTS Mitochondrial carrier protein signature 31 45 IPR002067 GO:0055085
Lal13g0506 325 PRINTS Mitochondrial carrier protein signature 80 100 IPR002067 GO:0055085
Lal13g0506 325 PRINTS Mitochondrial carrier protein signature 130 148 IPR002067 GO:0055085
Lal13g0506 325 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Lal13g0506 325 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 4 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0506 Lal-Chr13 3275019 3279825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0506 4 319 Chloroplast and Mitochondria Gene Families AT2G47490 74.367 1.01e-163 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0506 K15115 - jre:108994143 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0506 13 3275019 3279825 Lal13g0506 13 3275019 3279825 ECH